Gene YPK_3249 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_3249 
Symbol 
ID6088303 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp3553210 
End bp3553800 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content51% 
IMG OID641598326 
ProductDJ-1 family protein 
Protein accessionYP_001721971 
Protein GI170025466 
COG category[R] General function prediction only 
COG ID[COG0693] Putative intracellular protease/amidase 
TIGRFAM ID[TIGR01383] DJ-1 family protein 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGTAT CGGCGCTGGT TTGCCTGGCT CCTGGTAGCG AGGAAACCGA GGCAGTCACA 
ACTATTGATA TTCTGGTGCG CGCAGGCATC AATGTCACAA CCGCCAGTGT CGCGGGTGAT
GGCGCACTGG AGATTATCTG TTCGCGCGGA GTGAGGCTGT TGGCCGATAC CCGTTTAGTG
GATGTCGCCG ATCAAAAATT TGATGTGATA GTGCTCCCCG GTGGGATTAA AGGCGCGGAG
TGCTTTCGCG ATAGTCCGTT GCTGGTTGCA ACAGTCCGAC AAACCCATAA TGAGGGCCGT
TTGGTTGCCG CAATTTGTGC GGCTCCCGCA CTGGTGCTCG AGCATCACCA GTTATTTCCC
GTAGGGAATA TGACCGGGTT CCCCTCACTA AAAGATAAAA TAGCCCCAAA TAAATGGATG
GATCAACGCG TCGTCTACGA TAGACGGGTT AATTTAGTCA CCAGCCAAGG GCCAGGAACA
TCCATCGATT TCGCTCTAAA AATTGTGTTT TTATTACTTG GACGGGAAAA GGCGGAAGAA
ATTGCCTGGC AGCTAGTGTT GCCGCCAGGA ATTTATAATT ATCGGGAATG A
 
Protein sequence
MSVSALVCLA PGSEETEAVT TIDILVRAGI NVTTASVAGD GALEIICSRG VRLLADTRLV 
DVADQKFDVI VLPGGIKGAE CFRDSPLLVA TVRQTHNEGR LVAAICAAPA LVLEHHQLFP
VGNMTGFPSL KDKIAPNKWM DQRVVYDRRV NLVTSQGPGT SIDFALKIVF LLLGREKAEE
IAWQLVLPPG IYNYRE