| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_3245 |
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| Symbol | |
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| ID | 6087102 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | + |
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| Start bp | 3548754 |
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| End bp | 3549641 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641598322 |
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| Product | protoheme IX farnesyltransferase |
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| Protein accession | YP_001721967 |
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| Protein GI | 170025462 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0109] Polyprenyltransferase (cytochrome oxidase assembly factor) |
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| TIGRFAM ID | [TIGR01473] protoheme IX farnesyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTAAGC AATACCTGCA AGTCACTAAG CCAGGAATTA TTTTCGGTAA TTTAATTTCT
GTCATTGGGG GTTTTCTCCT CGCTTCCAAG GGCGATATTG ATTACCCCCT GTTTCTCTCC
ACCTTATTAG GTGTCTCGTT AGTTGTTGCC TCCGGGTGCG TATTTAACAA CTATATCGAT
CGAGATATCG ATAAAATCAT GGAGAGAACG AAGAATCGTG TCCTGGTCAA AGGGCTTATC
GATCCGAAGG TATCCCTGAT TTATGCATCG GTACTGGGTA TTGCTGGCAT GCTGTTGCTC
TACGTGGCAG CTAATGCATT AGCAATGATG CTGGCTGTTA TTGGTTTCGT TATCTATGTT
GGGGTGTATA GCCTCTACAT GAAACGTAAA TCAGTCTACG GCACCTTGAT TGGCAGCTTG
TCAGGCGCCG CTCCCCCCGT TATTGGTTAC TGTGCCGTAA CGGGGCAATT CGACACTGGC
GCACTGATCT TGTTGCTGAT CTTCAGTCTG TGGCAAATGC CTCATTCCTA TGCCATCGCC
ATCTTCCGCT TTAAGGATTA TCAGGCCGCC AACATTCCGG TACTCCCGGT GATAAAAGGG
ATATCGGTCA CCAAAAACCA TATTACCCTT TATATTTTGG CGTTTATGGT CGCAACCTTG
ATGCTGACAT TAAGTGGCTA TGCCGGTTAT AAATATCTGG TTGTGGCTGC CGCGGTTAGC
GTCTGGTGGC TGGGTATGGC ACTGCGCGGT TATAAGGCAA CGAATGACAG CGTATGGGCG
AGAAAACTCT TTGTCTTCTC TATCATTGCC ATTACGTCAT TGAGCGTCAT GATGTCAGTT
GATTTCAATG TACACTCTTC GGCAGTACTC CTGACTTACG CTGGATAG
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| Protein sequence | MIKQYLQVTK PGIIFGNLIS VIGGFLLASK GDIDYPLFLS TLLGVSLVVA SGCVFNNYID
RDIDKIMERT KNRVLVKGLI DPKVSLIYAS VLGIAGMLLL YVAANALAMM LAVIGFVIYV
GVYSLYMKRK SVYGTLIGSL SGAAPPVIGY CAVTGQFDTG ALILLLIFSL WQMPHSYAIA
IFRFKDYQAA NIPVLPVIKG ISVTKNHITL YILAFMVATL MLTLSGYAGY KYLVVAAAVS
VWWLGMALRG YKATNDSVWA RKLFVFSIIA ITSLSVMMSV DFNVHSSAVL LTYAG
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