Gene YPK_3238 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_3238 
Symbol 
ID6090248 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand+ 
Start bp3541261 
End bp3541839 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content46% 
IMG OID641598315 
Producthypothetical protein 
Protein accessionYP_001721960 
Protein GI170025455 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3056] Uncharacterized lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.317659 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTAAAGA AAATTCTTTT CCCGCTGTTG GCTATTTTTA TACTGGCCGG TTGTGCTACC 
ACGAGTAACA CGCTGAATGT CACGCCAAAA GTGGTATTGC CAACACAAGA TCCAACACTG 
ATGGGTGTGA CTATCAGTAT CAATGGCGCG GATCAGCGTC AGGACGCTGC GCTGGCTAAA 
GTTAATCGCG ATGGGCAATT AGTGGTGTTA ACACCATCAC GTGATTTGCG CTTCCTGTTA 
CAGGAGGTTC TCGAAAAACA AATGACGGCC CGCGGTTATA TGATTGGTGC TGATGGTGCG 
GTTGACCTAC AAATTGTGGT TAACCAATTG TATGCTGATG TGCAGGAAGG TAACTTGCGC 
TACAACATCA CTACCAAAGC CGATATCTCA ATTACGGCAA CGGCGAAAAA CGGCAACAAG 
CAGGTAAAAA ACTACCGCGC GACCTACAAT GTTCAGGGAG CATTTACGGC AACTAACGAA 
AAAATCACCG ATGCTGTAAA TAGCGTGTTA AGTGACGTCA TTGCCGATAT GGCGCAAGAC 
ACTAGCGTCA GTAGTTTCAT CAAACAAAAT GCACGCTAA
 
Protein sequence
MLKKILFPLL AIFILAGCAT TSNTLNVTPK VVLPTQDPTL MGVTISINGA DQRQDAALAK 
VNRDGQLVVL TPSRDLRFLL QEVLEKQMTA RGYMIGADGA VDLQIVVNQL YADVQEGNLR 
YNITTKADIS ITATAKNGNK QVKNYRATYN VQGAFTATNE KITDAVNSVL SDVIADMAQD 
TSVSSFIKQN AR