Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_3233 |
Symbol | clpX |
ID | 6088838 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | - |
Start bp | 3536309 |
End bp | 3537580 |
Gene Length | 1272 bp |
Protein Length | 423 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641598310 |
Product | ATP-dependent protease ATP-binding subunit ClpX |
Protein accession | YP_001721955 |
Protein GI | 170025450 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1219] ATP-dependent protease Clp, ATPase subunit |
TIGRFAM ID | [TIGR00382] endopeptidase Clp ATP-binding regulatory subunit (clpX) |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAGATA AGCGCAAAGA CGGTTCAGGA AAGCTGCTGT ATTGCTCTTT CTGCGGCAAA AGCCAGCATG AAGTGCGTAA GCTAATTGCC GGGCCGTCAG TGTATATCTG CGATGAATGT GTCGATTTGT GTAATGACAT TATTCGCGAA GAGATTAAGG AAGTTTCCCC GCACCGGGAT CGCAGTTCAC TGCCAACACC GCATGAAATT CGCCACCACC TTGATGATTA TGTCATCGGG CAGGAACCTG CGAAAAAAGT GCTGGCAGTT GCGGTGTATA ACCACTACAA GCGTCTGCGT AACGGTGATA CCAGTAATGG TATTGAACTG GGTAAAAGTA ATATTTTGCT GATTGGTCCG ACAGGGAGCG GTAAAACGCT GTTGGCGGAA ACATTGGCTC GCCTCCTGGA CGTGCCATTT ACTATGGCGG ACGCGACTAC GCTGACTGAA GCTGGCTATG TGGGTGAAGA TGTTGAAAAC ATCATTCAGA AGCTACTACA GAAGTGTGAT TACGACGTAC AGAAAGCGCA ACGTGGTATC GTCTATATCG ATGAAATTGA TAAAATTTCA CGCAAGTCTG ATAATCCGTC GATCACCCGT GATGTCTCAG GTGAAGGCGT ACAGCAGGCT CTGCTGAAAT TGATCGAAGG GACCATTGCT GCGGTACCGC CACAAGGTGG TCGTAAGCAT CCACAGCAGG AGTTTTTGCA GGTTGATACC TCCAAGATTC TGTTTATCTG TGGTGGTGCT TTTGCCGGTT TGGACAAAGT TATTGGGCAG CGTATTAATA CCGGCTCAGG TATCGGCTTT GGCGCAGTGG TAAAAGGCCA ATCAGAAAAG GCAACAGAAG GTGAGTTGCT GAGTCAGGTT GAGCCAGAAG ACCTGATCAA ATTTGGCTTA ATCCCTGAAT TTATCGGTCG TTTGCCGGTA GTCGCCACAT TGAGCGAACT GAGTGAGGAT GCACTGATCC AGATCCTTAA AGAGCCGAAA AATGCACTGA CCAAGCAATA TCAGGCATTA TTCAGCCTTG AAGGTGTTGA ACTCGAGTTC CGTGACGAAG CATTGACTGC GATTGCCAAG AAAGCGATGG CGCGTAAAAC AGGTGCTCGT GGGCTGCGCT CCATTGTCGA AGGTGCTTTG CTGGATACGA TGTATGATCT GCCATCAATG GATAGCGTAG AGAAGGTGGT CGTGGATGAA TCAGTTATTG CTGGTCAATC TGCGCCGATG CTGATTTATG GTCAGCCCGA AGCGCAAGCT TCTGGTGAAT AA
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Protein sequence | MTDKRKDGSG KLLYCSFCGK SQHEVRKLIA GPSVYICDEC VDLCNDIIRE EIKEVSPHRD RSSLPTPHEI RHHLDDYVIG QEPAKKVLAV AVYNHYKRLR NGDTSNGIEL GKSNILLIGP TGSGKTLLAE TLARLLDVPF TMADATTLTE AGYVGEDVEN IIQKLLQKCD YDVQKAQRGI VYIDEIDKIS RKSDNPSITR DVSGEGVQQA LLKLIEGTIA AVPPQGGRKH PQQEFLQVDT SKILFICGGA FAGLDKVIGQ RINTGSGIGF GAVVKGQSEK ATEGELLSQV EPEDLIKFGL IPEFIGRLPV VATLSELSED ALIQILKEPK NALTKQYQAL FSLEGVELEF RDEALTAIAK KAMARKTGAR GLRSIVEGAL LDTMYDLPSM DSVEKVVVDE SVIAGQSAPM LIYGQPEAQA SGE
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