Gene YPK_3227 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_3227 
Symbol 
ID6089144 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp3528952 
End bp3529650 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content48% 
IMG OID641598304 
Productqueuosine biosynthesis protein QueC 
Protein accessionYP_001721949 
Protein GI170025444 
COG category[R] General function prediction only 
COG ID[COG0603] Predicted PP-loop superfamily ATPase 
TIGRFAM ID[TIGR00364] exsB protein 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACGTG CCGTAGTTGT CTTTAGTGGT GGGCAAGATT CCACCACCTG CTTAATTCAA 
GCGTTACAGC AATATGACGA AGTACATTGC ATTACTTTCG ATTACGGCCA ACGCCACCGT
ACGGAAATAG ATGTTGCTCG CGAACTTGCA CTCCAACTAG GTGCCACAGC ACATAAAGTA
CTGGATGTCG GTATGTTGAA CGAACTGGCC GTCAGTAGCC TGACTCGTGA CAGTATTCCT
GTCCCGTCAT ATGATGCCAA CGCTGACGGT GCATTACCCA GTACTTTTGT CCCTGGACGT
AACATACTGT TTCTCACCTT AGCCTCTATT TATGCGTATC AAGTGCAAGC CCAGGCCGTT
ATCACCGGTG TTTGCGAAAC TGACTTTTCT GGCTATCCGG ATTGCCGCGA TGAGTTTATT
AAGGCATTGA ACCACGCTAT CGATTTAGGT ATTGGCCGGG ATATCGCTTT TATCACCCCC
CTGATGTGGC TTGATAAAGC CGAAACCTGG GCACTAGCCG ATTACTATCA ACAATTGGAT
CTCATTCGCC ACCATACACT GACCTGTTAC AACGGAATTA AAGGAGACGG CTGTGGCCAA
TGTGCAGCGT GTCACCTACG GGCTAAAGGC CTGGCATCCT ATATGGCGAA TAAACAGCAG
GTTATATTAA ACCTAAAGCA AAAGGTGGGG TTAGCCTGA
 
Protein sequence
MKRAVVVFSG GQDSTTCLIQ ALQQYDEVHC ITFDYGQRHR TEIDVARELA LQLGATAHKV 
LDVGMLNELA VSSLTRDSIP VPSYDANADG ALPSTFVPGR NILFLTLASI YAYQVQAQAV
ITGVCETDFS GYPDCRDEFI KALNHAIDLG IGRDIAFITP LMWLDKAETW ALADYYQQLD
LIRHHTLTCY NGIKGDGCGQ CAACHLRAKG LASYMANKQQ VILNLKQKVG LA