Gene YPK_3224 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_3224 
Symbol 
ID6087712 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp3524782 
End bp3525822 
Gene Length1041 bp 
Protein Length346 aa 
Translation table11 
GC content47% 
IMG OID641598301 
Productpyridoxal-5'-phosphate-dependent protein beta subunit 
Protein accessionYP_001721946 
Protein GI170025441 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0031] Cysteine synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCAATA CATGGGTGAA AAATGCTATC AATGAAATAG AAGCTGACTT TCAACGCTCC 
GCTGATACGC ATTTAATTCG CTTAAATTTA TCAGCTTTTC CAGGTATTTA TCTGTATTTA
AAAGATGAAA GTACCCACCC AACAGGCAGT TTGAAACACC GCTTGGCGCG TTCACTGTTT
TTATATGGCT TATGCAATGG CTGGATAACC GAAGGGACGA CCATTATTGA AGCTTCATCG
GGGAGTACTG CGGTCTCGGA AGCCTACTTT GCTCGCCTGA TCGGCCTGCC ATTTATCGCT
GTCATGCCAA GTGGTACCAC GCGACGTAAA GTTGAACAAA TCACCTTCTA CTGTGGCCGT
TGCCATTTTG TCGATCATGC AGGACAAATT TATGCCGCAT CGGAACAACT GGCCCGTGAT
TTGAACGGTC ACTATATGGA TCAGTTTACT TATGCGGAAC GGGCAACCGA TTGGCGCGGC
AATAACAATA TTGCAGACAG CATTTTCCGT CAAATGGCAC GGGAGCCTTT CCCAACCCCA
GATTATATTG TGATGAGCGC AGGGACCGGT GGCACCTCAG CAACCTTAGG CCGTTATATC
CGTTATCAAG GACATGACAC TCAGTTGGTG GTGGTCGACC CGGAAAACTC GGTATTTTAT
GATTGCTTCT GTACCCGTGA CCGCACCGTC ACGGGCCGTT GTGGTAGCCG TATTGAAGGG
ATAGGCCGCC CACGTGCTGA ACCTTCTTTT ATTCCAGAAG TGATTGATAG CATGCTACGC
GTACCTGATG CTGCCAGTAT CGCCACTCTT CATTGGCTGG AGAGTATTCT TAGCCGTAAA
GTGGGAGCCT CAACGGGTAC CAATGTCTGG GGTGCATTGC AATTGGCAAA ACAGATGCGT
GAACAAGGCA AATCTGGCGC CATCGTGACA TTGCTCTGTG ACAGTGGTGA ACGTTATCTT
GATACCTATT ATAACGAGGA ATGGGTCAGC AATAACATTG GGGATTTAAC ACCATTTACC
AATGAATTGA ATAATCTGTA G
 
Protein sequence
MTNTWVKNAI NEIEADFQRS ADTHLIRLNL SAFPGIYLYL KDESTHPTGS LKHRLARSLF 
LYGLCNGWIT EGTTIIEASS GSTAVSEAYF ARLIGLPFIA VMPSGTTRRK VEQITFYCGR
CHFVDHAGQI YAASEQLARD LNGHYMDQFT YAERATDWRG NNNIADSIFR QMAREPFPTP
DYIVMSAGTG GTSATLGRYI RYQGHDTQLV VVDPENSVFY DCFCTRDRTV TGRCGSRIEG
IGRPRAEPSF IPEVIDSMLR VPDAASIATL HWLESILSRK VGASTGTNVW GALQLAKQMR
EQGKSGAIVT LLCDSGERYL DTYYNEEWVS NNIGDLTPFT NELNNL