Gene YPK_3223 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_3223 
Symbol 
ID6089678 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp3524195 
End bp3524656 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content47% 
IMG OID641598300 
ProductAsnC family transcriptional regulator 
Protein accessionYP_001721945 
Protein GI170025440 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTAGATA AAACAGATCG TAAACTACTG CGTATGCTGC AGGAAGACTG CACACAATCG 
CTGCACGTGT TGGCCGATGC GGTCAATCTA ACGTCAACCC CTTGCTGGAA ACGTTTAAAG
CGTTTGGAGG ATGAAGGTTT TATCCGCGGG CGAGTGGCGT TACTGGATAG TGAAAAATTG
GGGCTGGGGC TGACGGCATT TGTGCTGATC AAAACACAGC AGCATAACAG TGACTGGTAC
CAAGAGTTTG TCGCATTTAC TAAGCAAATG CCTGAGGTAC TGGCTTTCTA TCGTATGGCC
GGAGAATACG ACTATCTCAT GCAAGTAGAA GTGGCAGATA TGAAAAGTTA TGACCGTTTT
TATAAACGGA TGGTTAACGG CGTTCCGGGG CTTATTGATG TCACGTCAAG TTTTGCGATG
GAAAAGATTA AATACACCAC CGTGCTGCCA GTCCCGGAGT GA
 
Protein sequence
MLDKTDRKLL RMLQEDCTQS LHVLADAVNL TSTPCWKRLK RLEDEGFIRG RVALLDSEKL 
GLGLTAFVLI KTQQHNSDWY QEFVAFTKQM PEVLAFYRMA GEYDYLMQVE VADMKSYDRF
YKRMVNGVPG LIDVTSSFAM EKIKYTTVLP VPE