Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_3209 |
Symbol | |
ID | 6090338 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | + |
Start bp | 3511951 |
End bp | 3512409 |
Gene Length | 459 bp |
Protein Length | 152 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641598286 |
Product | transposase IS200-family protein |
Protein accession | YP_001721931 |
Protein GI | 170025426 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1943] Transposase and inactivated derivatives |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.000000115009 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGGGATG AAAAGAGCTT AGCGCACACC CGATGGAACT GTAAATATCA TATAGTTTTT GCGCCGAAGT ACCGAAGGCA GGTGTTCTAC AGGGAAAAAC GCAGAGCGAT TGGCAGTATT TTAAGAAAAC TGTGCGAATG GAAAAACGTG AATATCCTGG AAGCAGAATG CTGTGTGGAT CACATCCATA TGCTTCTGGA GATCCCGCCC AAGATGAGTG TCTCGGGATT TATGGGGTAC CTGAAGGGAA AGAGCAGTCT GATGCTTTAT GAGCAGTTTG GCGATTTGAA GTTCAAATAC CGTAACAGGG AGTTTTGGTG TCGAGGGTAT TACGTTGATA CGGTAGGGAA AAACACGGCC AGGATACAAG AATACATAAA GCACCAATTG GAAGAGGATA AAATGGGTGA GCAACTCTCG ATCCCGTATC CCGGTAGCCC GTTTACGGGC CGTAAGTAA
|
Protein sequence | MRDEKSLAHT RWNCKYHIVF APKYRRQVFY REKRRAIGSI LRKLCEWKNV NILEAECCVD HIHMLLEIPP KMSVSGFMGY LKGKSSLMLY EQFGDLKFKY RNREFWCRGY YVDTVGKNTA RIQEYIKHQL EEDKMGEQLS IPYPGSPFTG RK
|
| |