Gene YPK_3204 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_3204 
Symbol 
ID6089263 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp3502570 
End bp3505932 
Gene Length3363 bp 
Protein Length1120 aa 
Translation table11 
GC content47% 
IMG OID641598281 
Productpotassium efflux protein KefA 
Protein accessionYP_001721926 
Protein GI170025421 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3264] Small-conductance mechanosensitive channel 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTACTC TGGTTATTAT TGTTTTATTG TTATTTTCTT CGACCTTTGT GTTTGGAATA 
TCGGCCTTTG CGTCTGGAAT AAATGTTGAT GTGCCCACTC GCAGCGAGGT ACAGAGCCAG
CTCGATTTGT TATCAAAACA AAAAATATTA TCGCCGGCGG AAAAGTTAGC ACAGCAGGAT
TTGACTCAAA CGTTAGAGTA CCTTGATACC ATTGAGCGCA CTAAACAAGA GGCTAATCAA
CTTAAACAAC AACTGGCACA AGCTCCTGCA AAGTTACGCC AGGCAACCGA AGGGTTAGAG
GCGCTAAAAA GCAGTTCAGC TGATACCATG ACCAAGGAGT CATTGGCTAA TTATTCGTTG
CGCCAATTGG AATCACGTCT TAATGAAACG CTGGATAATT TACAATCGGC TCAGGAAGAT
CTCTCCGCTT ATAACAGTCA GCTAATCGCC CTGCAAACAC AGCCAGAACG TGTGCAAAGC
GCGATGTATA GCGCTTCTAT GCGTTTAATG CAGATCCGTA ACCAACTCAA TGGGCTGACG
CCGAATCAAG AGAGCCTTCG CCCGACTCAA CAGCAAGAAC TTCTGGCTGA ACAAGTGATG
TTGAACGGCC AGTTGGATCT AGAGCGTAAA AATCTGGAGG CAAATACCAC CTTACAAGAT
TTGCTGCAAA AACAACGGGA TTACACGACT GCACACATTA ATCAACTGGA GCGTTATGTT
CAGTTGCTAC AGGAGGTTGT CAGCGGTAAG AGGCTGATTC TCTCCGAGAA AACAGTTAAA
GAAGCGCAAG CACAGACTGA TGGCAGTGAT ATCCAAAATG ATCCACTCAT CAGCCGTGAA
TTGGCAATTA ACAAAGAGTT AAGCGAACGG CTGATTAATG CCACGAAAGA AGGCAATACG
CTGGTTCAGC AGAATATCCG GGTAAAAAAC TGGTTAGATC GCGCTCTGCA ATCTGAGCGT
AATTTAAAAG AACAAATCAC CGTATTGCGT GGCAGCTTAT TACTTTCACG AATTCTCTAT
CAACAGCAGC TCAACTTACC GGCTTCCGGC CTTATCACCA ATATGGGGCC ACGCATTGCA
GACTTGCGGC TGGAGCAATT TGAAATTAAC CAGCAGCGCG ATAAGTTATT CCAAGGGGAC
GACTATATCC AAACCCTGAT GGAGAGCAGT AAAGAGAAGG TTGACCCAAA TGTAGAAGAT
GCGCTGGGGC AGATTGTTGA TATCCGCCGT GAACTACTGG ATCAATTAAA TAAGCAACTG
GGTAACCAAT TGACACTGGC AATCAATTTA CAGATTAACC AGCAGCAGTT GCTCAGTGTC
AATGAGTCGC TGCAACATAC ATTAACGCAG CAAATATTTT GGGTTAGTAG TAATAAGCCA
ATGGATTGGT CTTGGCTGAA AGCCCTGCCA GGGGCGATCA AAACCGAACT GAGTAACTTC
CAGGTTACCC TGTCATTGGG GGATGCGCTG GCAGGCCTGC TCAAATCACT GGTTTTTCTA
ATACCAATGC TGGTTGTGGC TGTGGTGATC CGCTCCCGTT ACCACATGAT CAATACCTAT
TTAGATCAAC TGGCTGCTGA TATCGGGCAA TTGAAACGCG ATAGCCAAAT GCATACGCCA
AAGGCTATTT TGTTGACTGT GCTGAAAATC TTACCGAACG TATTACTTAT CTTGGGGATC
GGCTACTGGT GTTTGCGCTC AGATTTCAAC CTCAGTGGCT TGCTCTGGAG CTTCTTCCAG
CGCCTGGCAT TGTTCTGGCT GGTCTTTGAG CTGACCTATC GCATGTTATC GCCGGGGGGA
ATTACCGAGC GGCACTTTAT GATATCAACC GACCGTTGCG CCCATTATCG CCGCCAGATA
GTCCGCTTAG GTGCCGCGTT GCTTCCGGTT ATTTTCTGGT CTGTTCTGGG TGAACGAAGC
CCTCTACGGC TTGTGGATGA TGTTATTGGG CAGATAGTGA TTGTTATTGC CTTGGCATTA
TTAGCACTGT TTATTTTCCC ATTCTGCCGT GATAGCTGGC GTGAGAAAGA CTCCCATGCG
GTACGCTTAG TCATTATCAC TGCAATCACT GCGACACCTA TAGTATTGAT GGGGTTAATG
GTTGCGGGGT ATTTCTATAC AACATTGCAA TTAGCTGGCC GTTGGATTGA TAGCCTGTAT
TTACTCTTCT TGTGGAACAT TGTTTATCTG ACGGCGATCC GTGGATTAGG TGTTGCTGCA
CGGCGCTTGG CATACCGTCG AGCTATTGCG CGGCGGCAAA GTATGGGGAA AGAAGGGGCC
GAAGGCAGTG AACCGATAGA AGAACCTCCA TTGGCTCTGG ATCAAATTAA CCAACAATCA
TTGCGCTTGA CCACAATGGC GCTATTCCTG ATTTTTGCTA CCTGTTTTTA CTGGATCTGG
GCTGATCTGA TAACGGTTAT CTCTTATCTG GACAGTATCT CATTGTGGCA TTACACCGCC
ACTGTAGCTG GTGCGAGTGT AACGCAAGCG GTGACCTTGG GTAATATGCT AGTCGCCTTG
ATGGCACTGG TGGTCGCCTA TGTTCTGACC CGAAATTTAC CGGGCTTACT TGAAGTGGTG
GTGCTATCGC GCTTACAACT GCGCCAAGGC ACTTCTTACG CCATTACGAC GATTTTGACT
TACCTGATCA CGGCTGTGGG GGGGATAACC GCCTTAAGTT CGCTCGGGGT TTCATGGGAT
AAATTGCAAT GGCTGGTGGC AGCGCTCTCC GTGGGGCTGG GCTTTGGTCT ACAGGAAATA
TTTGCCAACT TTGTCTCGGG CTTGATTATT CTCTTTGAGC GGCCTGTACG GATTGGCGAT
ACCATTACGA TTGGTACCTA CTCGGGGACT GTCAGCAGAA TTCGTATCCG TGCCACCACC
ATTACCGATT TTGATCGTAA AGAAGTCATT GTGCCGAATA AAGCATTTGT GACTGAGCGC
CTGATTAACT GGTCACTATC AGACACGATC ACCCGCATCA TTATTAAAGT GGGGGTCGCG
TATGGTTCGG ATTTGGAAAA AGTAAAAGAA GTTCTGCTAC AGGCGGCTCA TGCCAATTCT
CGGGTAATGA CAGATCCAGA GCCTCAGGTA TTCTTCCTTA ACTTTGGTTC CAGCACACTT
GATCACGAGC TACGCTTGTA TGTCCGTGAA TTACGTGACC GCAGTTATAC GGTCGATGAG
CTGAATCGGG CTATTGATAA ATTATGCCGT GAAAATGACA TTAATATCGC GTTTAACCAG
TTAGACGTGT ATTTGCATAA ACCGGATGGT ACCGAAGTTC AGGAAATCAG CCGCCCGATT
GAAGCTACAA GCTTGCCTGC TACGCAATCA ATGCTGGGAA AGCCAAAACC TGATTTACCC
TGA
 
Protein sequence
MFTLVIIVLL LFSSTFVFGI SAFASGINVD VPTRSEVQSQ LDLLSKQKIL SPAEKLAQQD 
LTQTLEYLDT IERTKQEANQ LKQQLAQAPA KLRQATEGLE ALKSSSADTM TKESLANYSL
RQLESRLNET LDNLQSAQED LSAYNSQLIA LQTQPERVQS AMYSASMRLM QIRNQLNGLT
PNQESLRPTQ QQELLAEQVM LNGQLDLERK NLEANTTLQD LLQKQRDYTT AHINQLERYV
QLLQEVVSGK RLILSEKTVK EAQAQTDGSD IQNDPLISRE LAINKELSER LINATKEGNT
LVQQNIRVKN WLDRALQSER NLKEQITVLR GSLLLSRILY QQQLNLPASG LITNMGPRIA
DLRLEQFEIN QQRDKLFQGD DYIQTLMESS KEKVDPNVED ALGQIVDIRR ELLDQLNKQL
GNQLTLAINL QINQQQLLSV NESLQHTLTQ QIFWVSSNKP MDWSWLKALP GAIKTELSNF
QVTLSLGDAL AGLLKSLVFL IPMLVVAVVI RSRYHMINTY LDQLAADIGQ LKRDSQMHTP
KAILLTVLKI LPNVLLILGI GYWCLRSDFN LSGLLWSFFQ RLALFWLVFE LTYRMLSPGG
ITERHFMIST DRCAHYRRQI VRLGAALLPV IFWSVLGERS PLRLVDDVIG QIVIVIALAL
LALFIFPFCR DSWREKDSHA VRLVIITAIT ATPIVLMGLM VAGYFYTTLQ LAGRWIDSLY
LLFLWNIVYL TAIRGLGVAA RRLAYRRAIA RRQSMGKEGA EGSEPIEEPP LALDQINQQS
LRLTTMALFL IFATCFYWIW ADLITVISYL DSISLWHYTA TVAGASVTQA VTLGNMLVAL
MALVVAYVLT RNLPGLLEVV VLSRLQLRQG TSYAITTILT YLITAVGGIT ALSSLGVSWD
KLQWLVAALS VGLGFGLQEI FANFVSGLII LFERPVRIGD TITIGTYSGT VSRIRIRATT
ITDFDRKEVI VPNKAFVTER LINWSLSDTI TRIIIKVGVA YGSDLEKVKE VLLQAAHANS
RVMTDPEPQV FFLNFGSSTL DHELRLYVRE LRDRSYTVDE LNRAIDKLCR ENDINIAFNQ
LDVYLHKPDG TEVQEISRPI EATSLPATQS MLGKPKPDLP