Gene YPK_3178 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_3178 
Symbol 
ID6090089 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp3473942 
End bp3475315 
Gene Length1374 bp 
Protein Length457 aa 
Translation table11 
GC content39% 
IMG OID641598255 
Productphosphomannomutase 
Protein accessionYP_001721900 
Protein GI170025395 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1109] Phosphomannomutase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCAAAAC TAACCTGTTT TAAAGCCTAT GATATTCGTG GTCGATTGGG TGATGAATTG 
AATGAAGATA TAGCTTACCG TATTGGTCGC GCGTATGGTG AGTTTGCTAA ACCCAAAAAG
GTTGTAGTAG GGGGGGATGT TCGATTAACC AGTGAAAGTC TTAAGTTAGC GTTAAGTCAA
GGTTTACAAG ATGCAGGTAC TGATGTATTA GATATTGGTT TGTCAGGCAC TGAGGAGATA
TATTTTTCCA CCTTCCATCT TGGGGTTGAT GGTGGTATAG AAGTGACTGC CAGCCATAAC
CCAATAGACT ACAATGGAAT GAAGTTAGTG CGTGAAGGCT CCAGACCTAT CAGTGGAGAT
ACAGGGTTAC GGGATATTCA GTATTTAGCT GAACAGAATG AATTCCCTCC AGTGGACAGT
AAAAAAAGAG GTGGTTATAA AAAAATATCT ATTATTAATG ACTATGTTGA ACACTTAATT
AACTATATTA ATCCTTCTCT TTTTAAACCG TTGAAATTAG TTGTAAATAC TGGCAATGGT
GCTGCTGGTC ATGTTATTGA TGCTTTAGAA AAACGTTTTT CAGAATTAAA CATACCGATA
ACTCTGATTA AAATTCATCA TGAGCCAGAT GGCACATTCC CGAATGGTAT TCCGAATCCA
CTGTTACCAG AATGCCGCCA GGATACTACT GATGCTGTGC TGATGCATGA CGCTGATATG
GGTATTGCCT TTGATGGCGA TTTTGACCGT TGTTTCTTCT TTAATAATAA GGGTGAGTTT
ATTGAAGGCT ATTATATCGT GGGGCTTTTA GCCGAAGCTT TTCTTCAAAA AAATGCTGGA
GCTAAAATTA TCCATGATCC ACGTTTAAGC TGGAATACTA TTGATATAGT TAATTCTTCT
GGTGGAACGC CTATAATGTC CAAAACCGGG CACGCTTTTA TTAAAGAACG CATGCGAGAA
GAAGATGCGG TTTATGGTGG CGAAATGAGT GCTCATCACT ACTTCCGCGA CTTTGCTTAT
TGTGATTCAG GGATGATTCC ATGGTTACTG ATTGCTGAGC TTTTATGTGT CAAAGAAAAA
AGTTTGGATC AGTTAGTTGA AGAGCGGATG CGTATTTACC CTGCATCTGG AGAAATTAAT
TCTAAGTTAA CCGATCCAAC CTCTGCGATA GCGCGTGTTC GTGCCGAATA TGAAGTTAAG
GCTATAGCTA TTGACGAAAC TGATGGTATT AGTATGGAAT TTGATGGGTG GCGTTTTAAT
TTACGCAGTT CAAATACTGA ACCTGTTGTT CGGCTTAATG TGGAGTCACA TTACAATAAG
ACATTAATGC ATCATAAAAC AGAAGAGATA CTTTCTCTAT TAAGAAAAGA ATAA
 
Protein sequence
MPKLTCFKAY DIRGRLGDEL NEDIAYRIGR AYGEFAKPKK VVVGGDVRLT SESLKLALSQ 
GLQDAGTDVL DIGLSGTEEI YFSTFHLGVD GGIEVTASHN PIDYNGMKLV REGSRPISGD
TGLRDIQYLA EQNEFPPVDS KKRGGYKKIS IINDYVEHLI NYINPSLFKP LKLVVNTGNG
AAGHVIDALE KRFSELNIPI TLIKIHHEPD GTFPNGIPNP LLPECRQDTT DAVLMHDADM
GIAFDGDFDR CFFFNNKGEF IEGYYIVGLL AEAFLQKNAG AKIIHDPRLS WNTIDIVNSS
GGTPIMSKTG HAFIKERMRE EDAVYGGEMS AHHYFRDFAY CDSGMIPWLL IAELLCVKEK
SLDQLVEERM RIYPASGEIN SKLTDPTSAI ARVRAEYEVK AIAIDETDGI SMEFDGWRFN
LRSSNTEPVV RLNVESHYNK TLMHHKTEEI LSLLRKE