Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_3175 |
Symbol | |
ID | 6091259 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | + |
Start bp | 3469447 |
End bp | 3471138 |
Gene Length | 1692 bp |
Protein Length | 563 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641598252 |
Product | putative cation:proton antiport protein |
Protein accession | YP_001721897 |
Protein GI | 170025392 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4651] Kef-type K+ transport system, predicted NAD-binding component |
TIGRFAM ID | [TIGR00932] transporter, monovalent cation:proton antiporter-2 (CPA2) family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.47283 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCACCATT CAACACCCTT AATCACCACT ATTGTAGGAG GCTTGGTTCT CGCCTTCCTC TTTGGCACAC TGGCTCACCG CCTGCGCATC TCACCACTGG TGGGGTACCT TGCAGCAGGG GTGCTGGCCG GGCCATTCAC GCCGGGGTTC GTTGCTGATA CATCATTAGC ACCTGAACTG GCTGAAATTG GTGTTATTTT GTTGATGTTT GGTGTTGGAC TTCACTTCTC GCTTAAAGAT CTTCTCGCTG TAAAATCAAT CGCCATACCC GGCGCAATCG CCCAGATTGC CGTTGCAACG CTGTTGGGGA TGGGATTATC ACATTTCTTA GGTTGGGATC TGATCACCGG GCTGGTCTTT GGTCTGTGCC TATCAACCGC CAGTACCGTG GTCTTGCTGC GGGCCTTGGA AGAACGGCAA TTGATTGATA GCCAACGAGG GCAAATCGCG ATTGGCTGGT TGATTGTCGA AGATTTGGCC ATGGTATTGA CGCTGGTACT CCTCCCTGCT TTTGCGGGCG TGATGGGGAA CGAAACGACC AACCTGAACC AATTATTTAC TGAGTTAGCG ATTACTATCG GTAAAGTTAT CGCCTTTATT ACTCTGATGA TTGTCGTAGG CCGCCGCCTG GTGCCATGGA TATTGGCTAA AACCGCCAGT ACCGGCTCAC GAGAGCTGTT TACCTTAGCC GTGCTGGTTT TGGCCTTAGG GATTGCCTAC GGTGCCGTAG AGCTGTTTGA TGTCTCCTTT GCTCTGGGCG CATTCTTCGC GGGGATGGTT TTGAATGAGT CGGAGCTCAG CCACCGAGCG GCACAAGATA CCTTACCGCT ACGTGATGCG TTTGCGGTGC TGTTCTTCGT CTCTGTCGGT ATGCTGTTCG ACCCAATGAT TCTGGTCAAT GAACCTTTGG CCGTTATCGC CTCGCTGGCC ATTATCATCT TTGGTAAATC CGCTATCGCT TTCGCCCTAG TACGGCTATT TGGTCACTCA AAACGGACCG CCCTAACCAT TTCGGTCAGT TTGGCACAAA TCGGCGAGTT CGCCTTTATT TTGGCTGGGT TGGGTATTTC TCTCGGTTTA CTGTCTGGGC ATGGCCGTAA CTTGGTACTG GCGAGTGCGA TCCTGTCTAT TATGCTTAAC CCGCTACTCT TCACCTTACT TGATCGTTAT TTGGCTAAGA CAGAGACCAT GGAGGATTTG ATCCTGGAAG AGGCCGTCGA GGAAGAGAAA CAGATCCCCG TTGATTTATG TAACCATGTC CTTTTGGTTG GCTACGGCCG TGTTGGCAGC TTATTAGGTG CCAAGTTGCA TGCCGAAGGG ATCCCACTGG TGGTTATCGA AAACTCACGG CCCAGAGTCG AAGCCTTGCG GGAACAAGGT ATTAACGCGG TCTTCGGCAA CGCGGCCAAC GCCGATGTTA TGGCGCTGGG TCGCCTGGAT TGTGCCCGTT GGTTATTGCT GACCATACCC AATGGCTACG AAGCAGGGGA AATTGTCGCA TCGGCCAGAA TTAAGCGCCC CGATCTAGAG ATAATCGCCC GTGCACATTA CGATGACGAA GTCGTTTATA TCTCTGACCG TGGTGCCAAC CAAGTGGTCA TGGGCGAGCG TGAAATTGCC AACAGTATGC TCAATATGCT GAAAATAGAA ACACTGACTG AAGAAGATAA AATGCCGGTT TGCCCGATTT AA
|
Protein sequence | MHHSTPLITT IVGGLVLAFL FGTLAHRLRI SPLVGYLAAG VLAGPFTPGF VADTSLAPEL AEIGVILLMF GVGLHFSLKD LLAVKSIAIP GAIAQIAVAT LLGMGLSHFL GWDLITGLVF GLCLSTASTV VLLRALEERQ LIDSQRGQIA IGWLIVEDLA MVLTLVLLPA FAGVMGNETT NLNQLFTELA ITIGKVIAFI TLMIVVGRRL VPWILAKTAS TGSRELFTLA VLVLALGIAY GAVELFDVSF ALGAFFAGMV LNESELSHRA AQDTLPLRDA FAVLFFVSVG MLFDPMILVN EPLAVIASLA IIIFGKSAIA FALVRLFGHS KRTALTISVS LAQIGEFAFI LAGLGISLGL LSGHGRNLVL ASAILSIMLN PLLFTLLDRY LAKTETMEDL ILEEAVEEEK QIPVDLCNHV LLVGYGRVGS LLGAKLHAEG IPLVVIENSR PRVEALREQG INAVFGNAAN ADVMALGRLD CARWLLLTIP NGYEAGEIVA SARIKRPDLE IIARAHYDDE VVYISDRGAN QVVMGEREIA NSMLNMLKIE TLTEEDKMPV CPI
|
| |