Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_3172 |
Symbol | |
ID | 6088112 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | + |
Start bp | 3467287 |
End bp | 3467745 |
Gene Length | 459 bp |
Protein Length | 152 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641598249 |
Product | putative membrane efflux protein |
Protein accession | YP_001721894 |
Protein GI | 170025389 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGATC GTTCTGATAC CGGATGTCAG CAGCCCGTTA ATGTTTCAGT CAAACGTACA TCTTTCTCTA TTTTGGGTGC TATCAGCGTA TCTCACCTAC TCAACGATAT GATCCAGTCG CTGATCCTGG CGATTTATCC TTTATTACAA GCTGAGTTCT CATTGAGTTT TGCTCAAATA GGATTGATCA CGCTAACTTA CCAATTGACG GCTTCGTTAC TACAACCGCT GATTGGCTTA TATACGGATA AACACCCCCA GCCATACTCA TTACCCATCG GTATGGGGTT CACGCTGTCT GGCATATTAC TGCTGGCAGT AGCCACAACC TTCCCGGTGG TATTATTAGC GGCAGCATTG GTCGGTACTG GCTCTTCTGT ATTCCACCCA GAATCATCAC GAGTCGCCCG TATGGCATCC GGTGGGCGCC ATGGTTGTGC CCAGAAAACC CCCAGCTAG
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Protein sequence | MTDRSDTGCQ QPVNVSVKRT SFSILGAISV SHLLNDMIQS LILAIYPLLQ AEFSLSFAQI GLITLTYQLT ASLLQPLIGL YTDKHPQPYS LPIGMGFTLS GILLLAVATT FPVVLLAAAL VGTGSSVFHP ESSRVARMAS GGRHGCAQKT PS
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