| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_3165 |
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| Symbol | copA |
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| ID | 6090971 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | + |
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| Start bp | 3459961 |
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| End bp | 3462846 |
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| Gene Length | 2886 bp |
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| Protein Length | 961 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641598244 |
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| Product | copper exporting ATPase |
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| Protein accession | YP_001721889 |
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| Protein GI | 170025384 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2217] Cation transport ATPase
[COG2608] Copper chaperone |
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| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01511] copper-(or silver)-translocating P-type ATPase
[TIGR01525] heavy metal translocating P-type ATPase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.517155 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTGCAAA CCACACTGCT CGCCTTACAA GGACTTTCTT GTATGAATTG TGCTCAACGC
GTTAAAGCCG CGTTGGAAAG CCGTGAGGAT GTTCACCATG CTGAAGTGAA TGTTCACTAC
GCTAAAGTGA CTGGTGAAGC CGACACTCAT GCACTCATTG AAACGATCAA ACAGACCGGT
TATCAGGCTA CAGAAGCCCA AACGCCGGAC GTTGAATTAC ACCTATCAGG ATTGAGCTGC
GGGCATTGCA CTGAGACCGT CCGTAAAGCG CTGGAAGCGG TTTCGGGGGT TATTTCTGCC
GATGTAACCC TCGAGAGTGC CAACGTGTAC GGCAAGGCCG ATATACAGAC ATTGATTGCC
GCAGTGGAAC AGGCTGGCTA TCACGCCACA CAGCAAGGTA TCGACTCCCC AAAAACTGAG
CCGCTGACAC ACTCAGCCCA ATCTCAGCCG GAATCTCTGG CAGCGGCCCC GAATACAGTT
CCGGCAACAA ACGTGGCTTT AGCCACAAGT ACGGTTTCTG ATACAAATAC CGTTTTACCT
ACAAATACCG CTTTACCTAC AAATACAACG TCGACAACTT CAACAGCCGA TACGGCGTCA
GCCACCAGCA CGGCACCGGT GATCAATCCG CTGCCAGTGA CCGAATCAGT GGCCCAGCCG
GCAGCCTCAG AAGGGGAGAG TGTTCAGCTA TTACTGACGG GGATGAGCTG TGCCAGTTGT
GTCTCTAAAG TACAAAATGC ATTGCAACGT GTTGATGGGG TTCAGGTGGC CCGCGTTAAT
CTGGCTGAGC GCAGTGCATT GGTCACAGGG ACCCAAAATA ACGAAGCCTT AATCGCTGCG
GTTAAAAATG CCGGTTACGG CGCGGAAATT ATTGAAGACG AAGGGGAGCG ACGCGAGCGG
CAACAGCAAA TGTCGCAAGC CAGTATGAAG CGCTTCCAAT GGCAAGCGGC ATTAGGTCTG
TTGTTAGGTA TCCCATTGAT GGCCTGGGGG CTGTTTGGCG GTAGCATGAC GCTGACGCCA
GAAACCCAAA CGCCCTGGCT TATCATCGGG ATTATCACGT TGCTGGTAAT GATATTTGCG
GGTGGTCACT TCTACCGTAA TGCGTGGGTC AGCCTGAAAA ATGGCAGTGC GACCATGGAT
ACCTTGGTCG CTCTGGGGAC AGGTGCGGCC TGGATCTATT CCATCACCGT CAATATCTGG
CCAGATGTTT TCCCTATGGA GGCTCGTCAC CTTTATTACG AAGCCAGTGC CATGATCATC
GGTTTGATTA ACCTTGGTCA TGCGATGGAA CAACGTGCCA GACAGCGCTC ATCTAATGCG
CTCGAACGCC TGTTAGATTT GGCCCCACCA ACGGCAAAGT TAGTGACCGA TGACGGCGAG
AAAGTGATCC CGCTGGCTGA TGTCCAACTG GGGATGATCC TACGCCTGAC TACTGGCGAT
CGCGTACCGG TTGACGGCGA GATTGTGCAG GGCGAAGTGT GGATGGATGA AGCGATGCTG
ACTGGTGAGC CGATCCCACA ACAGAAATCA GTCGGTGATA TTGTCCACGC GGGGACACAA
GTACAAGATG GAACCGTACA ATTTCGGGCT AGCGCTATCG GTAGCCAAAC GACCTTGGCG
CGGATTATCA AACTAGTCCG TCAGGCACAA AGCAGTAAAC CGGAAATCGG CAAATTGGCA
GACCGTATCT CTGCGGTATT CGTCCCAACG GTGGTGGTCA TTGCCATTGT CGCTGGCCTG
ATTTGGTATT TCTTCGGCCC ACAACCCCAG TTGGTCTATA CCCTGGTGGT GGCCACCACG
GTGTTAATTA TCGCCTGCCC TTGTGCTTTG GGCTTAGCGA CACCGATGTC GATTATCTCT
GGCGTCGGCC GGGCCGCTGA ATTTGGTGTA TTGGTTCGAG ATGCAGATGC ATTGCAGCAA
GCCAGTAACC TCGATACGTT AGTGTTCGAT AAAACCGGCA CACTGACTGA GGGGCACCCG
CAGGTAGTGG CAATCCATAC CTTTAATGGT GTCAGTGAGC AACAGGCTTT GGGCTGGGCG
GCAGCATTGG AAACGGGATC AAATCACCCG CTGGCGCGCG CTATCTTACA ACGTGCTGAA
GGGCTGACAT TGGCCACCGC CAGCCAATTT CGTACATTGC GCGGTTTGGG GGTCAGTGGT
GAAGTTGACG GCATTCCACT GCTCCTTGGC AATAATCGGC TACTGGAAGA GCAACAGATT
GATACCCGCG AGCTGCAATC ATTGATACAG CAACAAGCGG AAAGTGGCGC AACACCGGTT
ATTCTGACCG CCAATGGTAA GCCCGCCGCA CTGTTATCGA TCCGTGATCC ATTGCGCGAA
GACAGTATCG GCGCATTACA GCGGCTGCAT CAATTGGGCT ATAGTCTGGT GATGTTGACC
GGTGACAACC CTATTACCGC CAATGCCATT GCGAAAGAAG CCGGTATTGA TCGTGTGATC
GCGGGCGTTC TGCCAGATGG CAAAGCCGAT GCTATCAAGC AACTGCAAGC GGCCGGGCAT
AAAGTGGCGA TGATTGGTGA TGGCATTAAC GATGCCCCTG CATTAGCACA AGCGGATGTC
GGGATTGCCA TGGGGGGCGG CAGTGATATC GCGATTGAAA CCGCGGCGAT TACCCTTATG
CGTCACAGTT TGCACGGTGT TGTCGATGCG GTAGAACTTT CCAAAGCAAC ATTACGTAAC
ATGAAGCAAA ACCTGTTGGG CGCGTTCTTC TACAATGCGC TGGGCATTCC CATTGCCGCA
GGGATTTTAT ATCCCTTCAC CGGTACATTG CTCAGCCCGG TCGTCGCCGG AGCGGCAATG
GCGTTGTCGT CCATTACGGT CGTCAGTAAC GCTAACCGTT TACTGCGCTT TAAGCCTAAA
CAGTAA
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| Protein sequence | MLQTTLLALQ GLSCMNCAQR VKAALESRED VHHAEVNVHY AKVTGEADTH ALIETIKQTG
YQATEAQTPD VELHLSGLSC GHCTETVRKA LEAVSGVISA DVTLESANVY GKADIQTLIA
AVEQAGYHAT QQGIDSPKTE PLTHSAQSQP ESLAAAPNTV PATNVALATS TVSDTNTVLP
TNTALPTNTT STTSTADTAS ATSTAPVINP LPVTESVAQP AASEGESVQL LLTGMSCASC
VSKVQNALQR VDGVQVARVN LAERSALVTG TQNNEALIAA VKNAGYGAEI IEDEGERRER
QQQMSQASMK RFQWQAALGL LLGIPLMAWG LFGGSMTLTP ETQTPWLIIG IITLLVMIFA
GGHFYRNAWV SLKNGSATMD TLVALGTGAA WIYSITVNIW PDVFPMEARH LYYEASAMII
GLINLGHAME QRARQRSSNA LERLLDLAPP TAKLVTDDGE KVIPLADVQL GMILRLTTGD
RVPVDGEIVQ GEVWMDEAML TGEPIPQQKS VGDIVHAGTQ VQDGTVQFRA SAIGSQTTLA
RIIKLVRQAQ SSKPEIGKLA DRISAVFVPT VVVIAIVAGL IWYFFGPQPQ LVYTLVVATT
VLIIACPCAL GLATPMSIIS GVGRAAEFGV LVRDADALQQ ASNLDTLVFD KTGTLTEGHP
QVVAIHTFNG VSEQQALGWA AALETGSNHP LARAILQRAE GLTLATASQF RTLRGLGVSG
EVDGIPLLLG NNRLLEEQQI DTRELQSLIQ QQAESGATPV ILTANGKPAA LLSIRDPLRE
DSIGALQRLH QLGYSLVMLT GDNPITANAI AKEAGIDRVI AGVLPDGKAD AIKQLQAAGH
KVAMIGDGIN DAPALAQADV GIAMGGGSDI AIETAAITLM RHSLHGVVDA VELSKATLRN
MKQNLLGAFF YNALGIPIAA GILYPFTGTL LSPVVAGAAM ALSSITVVSN ANRLLRFKPK
Q
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