Gene YPK_3153 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_3153 
Symbol 
ID6088332 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp3448595 
End bp3449089 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content46% 
IMG OID641598232 
Productpeptidyl-prolyl cis-trans isomerase B (rotamase B) 
Protein accessionYP_001721877 
Protein GI170025372 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000781097 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTCACGT TTCATACTAA TCACGGCGAT ATCGTCATTA ATACCTTCGC TGATAAAGCG 
CCGGCTACCG TTGAAAATTT CCTGAATTAC TGCCGTAAAG GTTTCTATGA TAACACTATT
TTCCACCGTG TTATTGATGG TTTCATGATC CAGGGCGGCG GTTTCGAACC AGGCATGAGC
CAGAAAACAA CGGATGCACC AATCAAAAAC GAAGCCAACA ACGGTCTGAA AAATACCCGT
GGCACGTTGG CAATGGCGCG TACCAATGAT CCACACTCGG CTACCGCTCA GTTCTTCATT
AACGTCGCTG ACAATGATTT TCTGAACTTC CGTTCAGAGC GCCCGGATGG CTGGGGTTAC
TGCGTATTTG CTGAAGTAAC CGACGGTTTG GACGTAGTTG ATAAAATCAA AAATGTTGCG
ACGGGCCGCA GTGGCATGCA TCAAGATGTG CCAAAAGAAG ATGTGATCAT CAAAAGCGTC
ACTATTAGCG AGTAA
 
Protein sequence
MVTFHTNHGD IVINTFADKA PATVENFLNY CRKGFYDNTI FHRVIDGFMI QGGGFEPGMS 
QKTTDAPIKN EANNGLKNTR GTLAMARTND PHSATAQFFI NVADNDFLNF RSERPDGWGY
CVFAEVTDGL DVVDKIKNVA TGRSGMHQDV PKEDVIIKSV TISE