Gene YPK_3142 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_3142 
Symbol 
ID6089651 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp3433250 
End bp3433945 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content53% 
IMG OID641598220 
Producthypothetical protein 
Protein accessionYP_001721866 
Protein GI170025361 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTAGAT GCACAGCACC AAGAAATGGA CACCGTACAG CCAGCGGAGC TGCAGCTTGC 
CCCGCATGCA GTAGCCGTTA CGGAGGCTAT CGCTCGTACT CCACATATTC TGCTCCTCCC
TATCCCTCTT CAGGGAATGG TGTCAGTGGA TCTGGTAGCG GTGGTGGATC TAGTAGCAGC
AGTAAACCAC GCTGGTCGCG AACTGGCTCA TCCGCGGTGT ACACTCCTGC CGAGGTGAGA
ACGCTCACAC CAGTCCGAGA AAACGTCGAG AAACGAGCAG CCGTACCTGA TCTTCGAGAT
GTCTTTCTTT GCCATGCATG GGACGACCGC AAAGGAGCAG CTAAAGAACT GCATGATCAG
CTAGAATCTC GCGGTGTGTC GGTTTGGTTC AGTGAAAAGG ATGTCCTCCT CGGAGCAACA
TTGCTACGCG AAATAGATAA GGGCCTAGCG AAGTCACGAG TAGGAATTGT GCTGGTGACC
CCGGCGTTGT TGAAGCGTCT TGCAGGAGAA GGTATTGCAG ACAAAGAGCT TTCGGCACTC
CTGGCTCGTG ATCTGCTCGT TCCAATTGTA CACGACACAA GTTATGAAGC TCTCCGCGAA
GTCAGCCCCT TACTCGGCTC GCGAAGTGGA TTAAATACCG CAGTAGATAC AATGGAAAAT
ATTGCTGAGA AACTCTCCGA GCTGGTAACG CTCTAA
 
Protein sequence
MARCTAPRNG HRTASGAAAC PACSSRYGGY RSYSTYSAPP YPSSGNGVSG SGSGGGSSSS 
SKPRWSRTGS SAVYTPAEVR TLTPVRENVE KRAAVPDLRD VFLCHAWDDR KGAAKELHDQ
LESRGVSVWF SEKDVLLGAT LLREIDKGLA KSRVGIVLVT PALLKRLAGE GIADKELSAL
LARDLLVPIV HDTSYEALRE VSPLLGSRSG LNTAVDTMEN IAEKLSELVT L