Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_3107 |
Symbol | |
ID | 6087619 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | + |
Start bp | 3406321 |
End bp | 3406776 |
Gene Length | 456 bp |
Protein Length | 151 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 641598185 |
Product | integrase |
Protein accession | YP_001721831 |
Protein GI | 170025326 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0236409 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTAACT TCAAGCCTAA TTGGGATAAA TCTAATAACA CACTGACGGT ACCGCCCGAC ATATCCAAAA ATGGTGATTA TCATGTGATC CCACTCTGTC ATTCAGCAAT TTCAGTGCTG GAAGAGATGG AAAGACGGTA CCCTGATTCC CCTTACCTTT TCCCTGCTGA AACCAAAGAA GGGCACCTAC TTACCAGTGA ATTTGCAAAA CAGATCAATA AGTTTTGTAA GCGAACCGAG TTTAAGAAAT TTACCCCTCG CGATATCCGC AGAACGTTCA AAACTCTTGG CGGCGATATG GGGATCAGTT CTGAACTAAG AGACAGACTG CAAAACCACA AGAAGCCAGG TGTTTCATCA AAGCACTACG ACCGCTATGA CTATTTGAAA GAAAAGCGAG AGGCAGTGAT TCTCTGGGAA GGCAGGATTT TGCAAATGTT TAACCAGCCC AAATAA
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Protein sequence | MTNFKPNWDK SNNTLTVPPD ISKNGDYHVI PLCHSAISVL EEMERRYPDS PYLFPAETKE GHLLTSEFAK QINKFCKRTE FKKFTPRDIR RTFKTLGGDM GISSELRDRL QNHKKPGVSS KHYDRYDYLK EKREAVILWE GRILQMFNQP K
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