Gene YPK_3100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_3100 
Symbol 
ID6090492 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp3402133 
End bp3402474 
Gene Length342 bp 
Protein Length113 aa 
Translation table11 
GC content51% 
IMG OID641598178 
Productminor tail family protein 
Protein accessionYP_001721824 
Protein GI170025319 
COG category[S] Function unknown 
COG ID[COG4718] Phage-related protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.033574 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAATTG AAACATTTCT TTGGCGAACT CAGGGCGTCC CAGAAGGTAG CTTTAACCAG 
CGGGTCAGAA CCGCTCAGTT CGGCGATGGC TATAAGCAAG TTGCTGGAGA TGGCATTAAC
CATGAAACGC AGTCATGGCC GCTGACATTT CAGGGCTTAG AAAAAGAGAT GATGCCCATT
CTGGCGTTTA TCCGCAGGCA TACCACTAAG TCATGCCAAT GGACGCCACC CTATGGTGTT
GTGGGCCTGT GGCGCGTATC CGCTGACTCC GTCAAGGCTG TACCGGTTGG CGGTAATGTT
ATGTCCGTCT CCTTCACTTT TGAGCAATCC TTCAAGCCTT AA
 
Protein sequence
MAIETFLWRT QGVPEGSFNQ RVRTAQFGDG YKQVAGDGIN HETQSWPLTF QGLEKEMMPI 
LAFIRRHTTK SCQWTPPYGV VGLWRVSADS VKAVPVGGNV MSVSFTFEQS FKP