Gene YPK_3084 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_3084 
Symbol 
ID6088721 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand- 
Start bp3391171 
End bp3391773 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content51% 
IMG OID641598162 
ProductCDP-alcohol phosphatidyltransferase 
Protein accessionYP_001721808 
Protein GI170025303 
COG category[I] Lipid transport and metabolism 
COG ID[COG0558] Phosphatidylglycerophosphate synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.855556 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACATTGT ATGACATTAA ACCTCAGTTT CAGAATCTGC TGCGACCGCT TGTCGTCAGG 
CTCCATGCGC GGGGAGTGAC CGCAAACCAG ATTACATTGC TGGCAATGCT GACCTCGGTC 
CTGCTGGGCG GGTGGCTTAT CTGTTTTCCG CAGCCTGTGT TATTTATTTC GCTACCTGTT 
TTTTTGTTCT TCCGCATGGC GCTCAATGCC ATCGACGGCA TGTTAGCCAG AGAGTTCAAT 
CAGCAATCGA CGCTCGGTGC CATTCTCAAT GAAGTCGGCG ATATTATTTC CGACGCCGCA 
CTCTATCTCG CTTTTGCTTT TTTGTCCGGC GTCTCCCCGT GGCTGGTTAT TCTGGTGGTA 
CTGCTTTCAT GGCTGACCGA GTTTTGTGGC GTGATTGCCC AGACGCTGAC GGGAATAAGA 
AACTACCGTG GCCCGCTCGG GAAAAGTGAT CGTGCTTTTG TGCTGGGGGC GTTAGGTCTG 
TTTATTGCGC TTTGGCCGCA GTATATCGGC GTTACCAATA TCGTGTTTGG CGTGACGGCA 
TTATTGTTGG TCTGGACCTG TATTAATCGC TGCCGTAGTG CGATAGAGGT GAAAAATGCC 
TGA
 
Protein sequence
MTLYDIKPQF QNLLRPLVVR LHARGVTANQ ITLLAMLTSV LLGGWLICFP QPVLFISLPV 
FLFFRMALNA IDGMLAREFN QQSTLGAILN EVGDIISDAA LYLAFAFLSG VSPWLVILVV 
LLSWLTEFCG VIAQTLTGIR NYRGPLGKSD RAFVLGALGL FIALWPQYIG VTNIVFGVTA 
LLLVWTCINR CRSAIEVKNA