Gene YPK_3081 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_3081 
Symbol 
ID6088602 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp3387847 
End bp3389610 
Gene Length1764 bp 
Protein Length587 aa 
Translation table11 
GC content52% 
IMG OID641598159 
Productalpha/beta hydrolase fold 
Protein accessionYP_001721805 
Protein GI170025300 
COG category[I] Lipid transport and metabolism 
COG ID[COG2267] Lysophospholipase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTCAGG AAGTGCGTTT ATTTCAAGAA GGCATGTTCA CCGCCAGCGA TGAAACATCG 
TTGTATTTTC GCCACTGGTC TGCCACGGAA GGTAACAGCA AGAAAGTTAT TGTGTTGTTT
CATCGCGGGC ATGAACACTC GGGGCGTCTG CAACATATTG TGGATGAACT GATGATGCCC
GATACCCATT TTTACGCGTG GGATGCGCGT GGACACGGGC AGTCGCCAGG GGCTCGTGGC
TACAGCCCCA GCCTTGCTCG CTCGGTTTTA GACGTGGATG AGTTTGTGCG TTTTGTGGCA
CAGGATGCGC AGGTCAACCT CGACGATATC GTGATGATTG CGCAAAGCGT GGGGGCCGTG
CTGGTATCAA CCTGGGTTCA TGACTACGCG CCGAAAATCC GTGGCATGGT GCTGGCGTCC
CCGGCATTTA AGGTCAAGCT GTATGTGCCG TTTGCCCGCC TGGGGCTGGG ATTAATGCAG
CGTATACGTG GCCTGTTTTA CGTGAATTCC TACGTGAAAG GGAAATTCCT CAGCCACGAC
CCCGAGCGCA TCGCCAGCTT TGAGCAGGAC AAATTAATCA CGCGCCAGAT CGCCGTCAAT
ATTTTGCTCG ATCTCTACAA AACGGCTGAA CGTATTGTTT CAGACTCGAC GGCGATTACT
CTCCCGACCC AGTTGCTTAT TTCCGGCGAT GATTTTGTGG TGCATGAGAA ACCGCAAAAA
CAATTTTATG CCGGTCTTCG CAGCGCGATA AAAGAGCAAC ATATTCTGCC GGGTTTCTAT
CACGACACGC TGGGTGAAAA AGACCGCTCT ATTGCTTTTG ATAAAATGAA AAACTTTATC
GACCGACTCT ATGCAACTGC GCCTTATGCC TTTGATTATA GCCATGAAGA TCGCTGGAGT
CCGAGTGCCG ATGCGTATCG TGAATTGCAG GCTCCACCAA AATCACGCTC GCTGGAAGGG
ATGTTTTATG CTGCGCTAAG TTTCGGCATG AAGACCATCG GGCGACAGTC CAAAGGGATG
CGCCTGGGTT ATGAAACAGG TTTTGACTCC GGCAGTACGC TGGATTACGT CTATCGTAAT
CAGCCTGAAG GTAATGGCAT TCTGGGGCGT ATGATTGACC ACAACTATCT GAACAGCGTT
GGCTGGCGTG GTATTCGCGT GCGTAAAGTG AATATCCAGC AGATGATTGA ACAGGCCGTT
GCGAAGATTC AGCTCAGTCA CATGCCGGTG CGAGTGGTCG ATATCGCCGC CGGACATGGC
CGCTATGTGC TGGATGCACT GGAAAAACAG CAGGGTATCG AAAGTATACT GCTGCGTGAT
TACAGCGATT TGAATGTAGA AAAAGGTCAG GCGATGATCG AAGAGCGTGG GCTAAGCCAC
GTCGCTCAGT TCAGAAAAGG CAACGCCTTC GACTATGATT CCCTTGCTAC GCTCGATCCT
GCTCCGACGC TGGGCATTGT TTCCGGGCTG TATGAGCTCT TCCCGGATAA CGACTTAATC
AAAACGTCGT TGGCCGGGCT GGCTGCGGCT ATTCCACCAG GCGGCATGCT GGTATACACC
GGGCAACCGT GGCACCCACA GTTAAAAACC ATCGCGTATA CCTTAACCAG CCATCAAAAC
GGGATCCCGT GGATGATGCG CGTGCGCAGC CAGAAAGAGA TGGACACGCT GGTGGAGCAG
GCCGGCTTTG AAAAATGTCA TCAGGTGATT GATGAGTTTG GCATTTTCAC CGTGTCGCTG
GCGGTGAGAA AGCAGCATGG TTGA
 
Protein sequence
MSQEVRLFQE GMFTASDETS LYFRHWSATE GNSKKVIVLF HRGHEHSGRL QHIVDELMMP 
DTHFYAWDAR GHGQSPGARG YSPSLARSVL DVDEFVRFVA QDAQVNLDDI VMIAQSVGAV
LVSTWVHDYA PKIRGMVLAS PAFKVKLYVP FARLGLGLMQ RIRGLFYVNS YVKGKFLSHD
PERIASFEQD KLITRQIAVN ILLDLYKTAE RIVSDSTAIT LPTQLLISGD DFVVHEKPQK
QFYAGLRSAI KEQHILPGFY HDTLGEKDRS IAFDKMKNFI DRLYATAPYA FDYSHEDRWS
PSADAYRELQ APPKSRSLEG MFYAALSFGM KTIGRQSKGM RLGYETGFDS GSTLDYVYRN
QPEGNGILGR MIDHNYLNSV GWRGIRVRKV NIQQMIEQAV AKIQLSHMPV RVVDIAAGHG
RYVLDALEKQ QGIESILLRD YSDLNVEKGQ AMIEERGLSH VAQFRKGNAF DYDSLATLDP
APTLGIVSGL YELFPDNDLI KTSLAGLAAA IPPGGMLVYT GQPWHPQLKT IAYTLTSHQN
GIPWMMRVRS QKEMDTLVEQ AGFEKCHQVI DEFGIFTVSL AVRKQHG