| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_3071 |
|---|
| Symbol | |
|---|
| ID | 6089540 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis YPIII |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010465 |
|---|
| Strand | + |
|---|
| Start bp | 3377386 |
|---|
| End bp | 3377916 |
|---|
| Gene Length | 531 bp |
|---|
| Protein Length | 176 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 641598149 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001721795 |
|---|
| Protein GI | 170025290 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4929] Uncharacterized membrane-anchored protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.333579 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTTAAGA GAAAATGGCT CAGCATCGCG GTCATTATCG TTGCCCTGAT CGTGGTGAAT
ATCTCTATTT ATCAGAAGCA ACATTTGTTG GCTAAAGGTG ACATCATTAT TCTGGAACTG
GCCCCGGTGG ATCCCCGATC ATTGATGCAG GGTGATTATA TGGCGCTGAG TTATGCCCTT
GTAGCGCCAT TCAATGAACA ATTCTATGCA GAACAAGAAA AATGCAGAGA AGAGCCTTCA
CTGCCTTGTC CTGAGTCCAA AAGGCGTCTA ATTGTTGAAC TCGACGATCG CCAGCGGGCC
ACCGCGGCCA GAATTGATCA GGGCGAGCCT CTGGCAGATA ATCAACATTA TTTGCAATAC
CGCTTTAAGG GCAGGTCTAT TCAGATAGGA ACGGATGCGT ATTTTTTCCA GGAAGGACAT
GCGGAAGATT ACGTCAATGC ACGCTACGGT GAGTTTCGTG TTGCTAAGGA TGGTTCGGCG
TTGTTGACCC ACTTACTGGA TGCCGATTTG CAGCGCATAG AGAATAAGTA A
|
|---|
| Protein sequence | MLKRKWLSIA VIIVALIVVN ISIYQKQHLL AKGDIIILEL APVDPRSLMQ GDYMALSYAL
VAPFNEQFYA EQEKCREEPS LPCPESKRRL IVELDDRQRA TAARIDQGEP LADNQHYLQY
RFKGRSIQIG TDAYFFQEGH AEDYVNARYG EFRVAKDGSA LLTHLLDADL QRIENK
|
|---|
| |