Gene YPK_3070 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_3070 
Symbol 
ID6089616 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp3375186 
End bp3377393 
Gene Length2208 bp 
Protein Length735 aa 
Translation table11 
GC content49% 
IMG OID641598148 
Producthypothetical protein 
Protein accessionYP_001721794 
Protein GI170025289 
COG category[S] Function unknown 
COG ID[COG4984] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.189766 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGAAC CGAAACCCGC GTCTTGGATG CCTTCACATG CGGCAGCGCA ACTCTGCCGC 
CAGTTGCAGT CACTCTTGCC AATGCATCTT CTTGCACCTG CGGCCTTTGA ACAGATATTA
CGTTATTGCG GTGTCCGGCC CGGACGTCAG GCTTGGCGTT TGTTTCTCAG TAGAACGCTG
CTACTGGCCG GATCCCTCGC GGCCATCTGT GGCGTCATCT TTTTCTTTGC GTGGAACTGG
GCAGCAATGC CCGCAATGGC AAAGTTCGGT ATCATCGAAT TGCTGATCGT GGCCTTGGCC
ATTCTCATCT GGTGGCGCTG GTATGATGCC GTCAGTCGCA CGGCATTATT GGCCGCAGGG
TTCCTCTTTG GTGCGCTGTT TGCCGTCTTC GGGCAGATTT ACCAAACCGG GGCCGATAGC
TGGGAGTTAT TCCGCGCTTG GGCACTAATT CTTCTCCCTT TAGCGTTGCT CAGCAGGCAG
GGGGGATTAT GGTTTTTAAC CTGGCTGGTG ACCAATATTG GCCTGAATCT CTTTTTCTTC
AGTTACTCAT CGCCGTTTAC GGTCTCTTTC TCACTGTTCG ACAGCATTTT TTATCTCAAC
ACCTTGTTCA CGTATGGTTA TTTGCTTTTT CAGGGATTAT GTCTTTTGGC CTGGGAAGTG
ACACAAAGAT TCAGCAAAAC CCAATCCCCC GATAAAACGG TAAATCGCTG GTTTCCGAGG
CTCATGGCAG CCTATTTTTT ACTGTCACTG ACAACCCCAA TAATCAGTGA ACTCACTTAC
TTTCACTTCC AACAGCCTGG CTACGTTTTA CTACTTTGCT GGGTAGCGGT TATGGCCGGT
GGCTACTGGT GGTATCGCTA TCGCCAACCC GATTTATGCA TGCTGACACT GGGTGTTTGC
AGCTTATTAG CGGTGGGAAC TGCCGCTATC CTTACCTCGG CGGGTTGGGG TTGGTATAGA
AATGTTGGCT CCCTGTTCCT GATTGGGATA TTAATCGCCC TATTGCTTGG CGCAGGGGGC
AAATTGTTAC TCCACTGGCG CCGAAAGATG TATCCAAATC AAGCCGTGGA GTTATCCCGA
TCAGCCTACG ACGAACTGTT AGTTAATCTC GAACAGCATT CGTTGCTCAA CGCAGACCAA
AAAGCGGTGT TGCTTGCTGA ACAAGGCAAG TTAACTCTGC CTTGGTATAT TCGTACCGCT
TTTGCGTTCG GCGGGTGGAT CGCGGCATTA ATCCTGTTAG CTCTGTTGAT ATTGCTAGGA
TTTGTCAGTG GGATGTTTGA CAATCTCAAT GCTGGAACAA TTATTGTTGT TTCACTGATA
GGCGGTGCCT TTGCCGCGTT CTTGCTCACC CGACCGGGTA TGGGGATACA GCAGATTGGT
TTGGTATGGG CAATAGCATC CTCGATCGGG TTATATAGCG GAATAATATT AATCCAGGAT
TCAAGCAGCA GATCGATGCT GATGCAAAGT CTGTGGTTCA TTCCTGTTTT GGCGGTTCTG
ATTGTGGTAT TCCACAATGA TATGTATCGC TTTCTGGCGA CGGGCACGTT GGTATTCATG
AGTATTGTTA CGACAAGCTA CGCTCTGATA TGGCACTTGG CACCCGATAA CCAACAGCTC
TTTTTCTTCA TTCCAATCCT GATAGTCACC GTCATTGTCA TGTTGATTCT TTGGCTGATC
TGCAATGAAA CTAAATTGCT GGCGACCATC AATGCACCAC TGATTCATCC GTTAATGTAT
GGCGGGATCG GGGGCATACT GGTGGTTTGC CTGCACAGTA TTCAGATGGG GAATATCCAT
GAATTCTACT GGATGTCAGA TCGGGGGCTT TATTTGGAAC AGAGTTTGAG CTACGGGATC
CCTGCCGCTT TCTTGCTGTT TACGCTAATT CAATGGGTTT TGCATCGCAG TAAGCTCAAG
CCACTCTGGT TGATAGCGGC GGTCGTAACC TCCCTTGCAG CCTATTTTGC ACCGGGAATG
GGTTTTGGTT TGGCACTGTT ATTGATTGCC CGTTATCAAG GGAATCAATG GTTACTGGGG
GTTGCAGCCT GTTTTCTCGC GGTTTACACC AGTAGCTGGT ATTACTTCCT CGGATTCAGC
TTGTTGTATA AATCCTTGTT ATTAATCGGG TGTGGTGTCT TGCTGCTGGT TTTGGCCGCC
GTATTGAATC GAGTACTCTC TGCTGGGGAG GTCAATCAAC ATGCTTAA
 
Protein sequence
MAEPKPASWM PSHAAAQLCR QLQSLLPMHL LAPAAFEQIL RYCGVRPGRQ AWRLFLSRTL 
LLAGSLAAIC GVIFFFAWNW AAMPAMAKFG IIELLIVALA ILIWWRWYDA VSRTALLAAG
FLFGALFAVF GQIYQTGADS WELFRAWALI LLPLALLSRQ GGLWFLTWLV TNIGLNLFFF
SYSSPFTVSF SLFDSIFYLN TLFTYGYLLF QGLCLLAWEV TQRFSKTQSP DKTVNRWFPR
LMAAYFLLSL TTPIISELTY FHFQQPGYVL LLCWVAVMAG GYWWYRYRQP DLCMLTLGVC
SLLAVGTAAI LTSAGWGWYR NVGSLFLIGI LIALLLGAGG KLLLHWRRKM YPNQAVELSR
SAYDELLVNL EQHSLLNADQ KAVLLAEQGK LTLPWYIRTA FAFGGWIAAL ILLALLILLG
FVSGMFDNLN AGTIIVVSLI GGAFAAFLLT RPGMGIQQIG LVWAIASSIG LYSGIILIQD
SSSRSMLMQS LWFIPVLAVL IVVFHNDMYR FLATGTLVFM SIVTTSYALI WHLAPDNQQL
FFFIPILIVT VIVMLILWLI CNETKLLATI NAPLIHPLMY GGIGGILVVC LHSIQMGNIH
EFYWMSDRGL YLEQSLSYGI PAAFLLFTLI QWVLHRSKLK PLWLIAAVVT SLAAYFAPGM
GFGLALLLIA RYQGNQWLLG VAACFLAVYT SSWYYFLGFS LLYKSLLLIG CGVLLLVLAA
VLNRVLSAGE VNQHA