Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_3070 |
Symbol | |
ID | 6089616 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | + |
Start bp | 3375186 |
End bp | 3377393 |
Gene Length | 2208 bp |
Protein Length | 735 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641598148 |
Product | hypothetical protein |
Protein accession | YP_001721794 |
Protein GI | 170025289 |
COG category | [S] Function unknown |
COG ID | [COG4984] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.189766 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTGAAC CGAAACCCGC GTCTTGGATG CCTTCACATG CGGCAGCGCA ACTCTGCCGC CAGTTGCAGT CACTCTTGCC AATGCATCTT CTTGCACCTG CGGCCTTTGA ACAGATATTA CGTTATTGCG GTGTCCGGCC CGGACGTCAG GCTTGGCGTT TGTTTCTCAG TAGAACGCTG CTACTGGCCG GATCCCTCGC GGCCATCTGT GGCGTCATCT TTTTCTTTGC GTGGAACTGG GCAGCAATGC CCGCAATGGC AAAGTTCGGT ATCATCGAAT TGCTGATCGT GGCCTTGGCC ATTCTCATCT GGTGGCGCTG GTATGATGCC GTCAGTCGCA CGGCATTATT GGCCGCAGGG TTCCTCTTTG GTGCGCTGTT TGCCGTCTTC GGGCAGATTT ACCAAACCGG GGCCGATAGC TGGGAGTTAT TCCGCGCTTG GGCACTAATT CTTCTCCCTT TAGCGTTGCT CAGCAGGCAG GGGGGATTAT GGTTTTTAAC CTGGCTGGTG ACCAATATTG GCCTGAATCT CTTTTTCTTC AGTTACTCAT CGCCGTTTAC GGTCTCTTTC TCACTGTTCG ACAGCATTTT TTATCTCAAC ACCTTGTTCA CGTATGGTTA TTTGCTTTTT CAGGGATTAT GTCTTTTGGC CTGGGAAGTG ACACAAAGAT TCAGCAAAAC CCAATCCCCC GATAAAACGG TAAATCGCTG GTTTCCGAGG CTCATGGCAG CCTATTTTTT ACTGTCACTG ACAACCCCAA TAATCAGTGA ACTCACTTAC TTTCACTTCC AACAGCCTGG CTACGTTTTA CTACTTTGCT GGGTAGCGGT TATGGCCGGT GGCTACTGGT GGTATCGCTA TCGCCAACCC GATTTATGCA TGCTGACACT GGGTGTTTGC AGCTTATTAG CGGTGGGAAC TGCCGCTATC CTTACCTCGG CGGGTTGGGG TTGGTATAGA AATGTTGGCT CCCTGTTCCT GATTGGGATA TTAATCGCCC TATTGCTTGG CGCAGGGGGC AAATTGTTAC TCCACTGGCG CCGAAAGATG TATCCAAATC AAGCCGTGGA GTTATCCCGA TCAGCCTACG ACGAACTGTT AGTTAATCTC GAACAGCATT CGTTGCTCAA CGCAGACCAA AAAGCGGTGT TGCTTGCTGA ACAAGGCAAG TTAACTCTGC CTTGGTATAT TCGTACCGCT TTTGCGTTCG GCGGGTGGAT CGCGGCATTA ATCCTGTTAG CTCTGTTGAT ATTGCTAGGA TTTGTCAGTG GGATGTTTGA CAATCTCAAT GCTGGAACAA TTATTGTTGT TTCACTGATA GGCGGTGCCT TTGCCGCGTT CTTGCTCACC CGACCGGGTA TGGGGATACA GCAGATTGGT TTGGTATGGG CAATAGCATC CTCGATCGGG TTATATAGCG GAATAATATT AATCCAGGAT TCAAGCAGCA GATCGATGCT GATGCAAAGT CTGTGGTTCA TTCCTGTTTT GGCGGTTCTG ATTGTGGTAT TCCACAATGA TATGTATCGC TTTCTGGCGA CGGGCACGTT GGTATTCATG AGTATTGTTA CGACAAGCTA CGCTCTGATA TGGCACTTGG CACCCGATAA CCAACAGCTC TTTTTCTTCA TTCCAATCCT GATAGTCACC GTCATTGTCA TGTTGATTCT TTGGCTGATC TGCAATGAAA CTAAATTGCT GGCGACCATC AATGCACCAC TGATTCATCC GTTAATGTAT GGCGGGATCG GGGGCATACT GGTGGTTTGC CTGCACAGTA TTCAGATGGG GAATATCCAT GAATTCTACT GGATGTCAGA TCGGGGGCTT TATTTGGAAC AGAGTTTGAG CTACGGGATC CCTGCCGCTT TCTTGCTGTT TACGCTAATT CAATGGGTTT TGCATCGCAG TAAGCTCAAG CCACTCTGGT TGATAGCGGC GGTCGTAACC TCCCTTGCAG CCTATTTTGC ACCGGGAATG GGTTTTGGTT TGGCACTGTT ATTGATTGCC CGTTATCAAG GGAATCAATG GTTACTGGGG GTTGCAGCCT GTTTTCTCGC GGTTTACACC AGTAGCTGGT ATTACTTCCT CGGATTCAGC TTGTTGTATA AATCCTTGTT ATTAATCGGG TGTGGTGTCT TGCTGCTGGT TTTGGCCGCC GTATTGAATC GAGTACTCTC TGCTGGGGAG GTCAATCAAC ATGCTTAA
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Protein sequence | MAEPKPASWM PSHAAAQLCR QLQSLLPMHL LAPAAFEQIL RYCGVRPGRQ AWRLFLSRTL LLAGSLAAIC GVIFFFAWNW AAMPAMAKFG IIELLIVALA ILIWWRWYDA VSRTALLAAG FLFGALFAVF GQIYQTGADS WELFRAWALI LLPLALLSRQ GGLWFLTWLV TNIGLNLFFF SYSSPFTVSF SLFDSIFYLN TLFTYGYLLF QGLCLLAWEV TQRFSKTQSP DKTVNRWFPR LMAAYFLLSL TTPIISELTY FHFQQPGYVL LLCWVAVMAG GYWWYRYRQP DLCMLTLGVC SLLAVGTAAI LTSAGWGWYR NVGSLFLIGI LIALLLGAGG KLLLHWRRKM YPNQAVELSR SAYDELLVNL EQHSLLNADQ KAVLLAEQGK LTLPWYIRTA FAFGGWIAAL ILLALLILLG FVSGMFDNLN AGTIIVVSLI GGAFAAFLLT RPGMGIQQIG LVWAIASSIG LYSGIILIQD SSSRSMLMQS LWFIPVLAVL IVVFHNDMYR FLATGTLVFM SIVTTSYALI WHLAPDNQQL FFFIPILIVT VIVMLILWLI CNETKLLATI NAPLIHPLMY GGIGGILVVC LHSIQMGNIH EFYWMSDRGL YLEQSLSYGI PAAFLLFTLI QWVLHRSKLK PLWLIAAVVT SLAAYFAPGM GFGLALLLIA RYQGNQWLLG VAACFLAVYT SSWYYFLGFS LLYKSLLLIG CGVLLLVLAA VLNRVLSAGE VNQHA
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