Gene YPK_3055 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_3055 
Symbol 
ID6089701 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp3363227 
End bp3363472 
Gene Length246 bp 
Protein Length81 aa 
Translation table11 
GC content52% 
IMG OID641598135 
Productputative transcriptional regulator, Nlp 
Protein accessionYP_001721781 
Protein GI170025276 
COG category[K] Transcription 
COG ID[COG3423] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATAAAC AAGATTGGCA TCCGGCAGAT ATTTTGGCGG GGTTGAAGAA ACGGGGTACG 
ACGATGGCGG CTCTTTCCAG AAAATCGGGG CTGGCCTCTT CAACGCTGGC GAATACGCTA
TTGCGCCCTT GGCCGAAAGG CGAAAGATTG ATTGCAGAGG TGCTGGAGTT ACACCCTGCG
GAGATTTGGC CGTCACGTTA CCTAAAACCT AAAAAATCAC CCGCAGAGTC AGTTAATCCA
GGCTGA
 
Protein sequence
MDKQDWHPAD ILAGLKKRGT TMAALSRKSG LASSTLANTL LRPWPKGERL IAEVLELHPA 
EIWPSRYLKP KKSPAESVNP G