| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_3053 |
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| Symbol | |
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| ID | 6091019 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | + |
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| Start bp | 3354616 |
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| End bp | 3360594 |
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| Gene Length | 5979 bp |
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| Protein Length | 1992 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641598133 |
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| Product | alpha-2-macroglobulin domain-containing protein |
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| Protein accession | YP_001721779 |
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| Protein GI | 170025274 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2373] Large extracellular alpha-helical protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATTTGT TGAGGTTTCT GCTGATCTCC CCCTTCGCCC TTATCAAGGG ACTCTATCGG
TTAAGCGCTT ATCTTTTACG GTTAGTGGGC CGCCTATTGC GCCCAGTCGT CGGTAACCTG
AATTGGCGCG CGCCACAATG GATGACGAAA ACCGCCAACG GGCTACACTG TGCTTTCAAC
CGTTCAGAGC AATGGGTCGC TAAGCATCCC AAAGGGATCA GTGCGGCAAT AGTGCTGTTG
ATGGCTGCCG CCAGCGCCGC ATTCTATGGC TATCACTGGT ACCTTAATCG GCCCCAACCG
ATTGAACCGG CACCTATGGT TTATCAGGAA ACCAGTATCA GAGTCTCGGC ACCAAGAACG
GTTAACTATC AGGCGCAAAA ACCAGAAGCC CAACCGCTTA GCCTTAATTT TATGCATTCA
GCCGCACCTA TCACCGCGAT GGGTCAGGTC GTCGATCAGG GCATCTCATT AACCCCCGCG
ATAGAGGGTG AATGGAAATG GGCAACTGAA CGCACGTTGG TGTTTACCCC CAAAAAAGCC
TGGCCGATGG GCGCTAACTA CCAAATTACG ATCGATGCAG AAAAACTTTT AGCACCACAG
ATTAAGCTCA ATCAGACCGA ACTTAATTTC ACAACGCCAG CTTTTGCTTA TCAATTGGAA
AAAGCGGAAT ATTATCAGGA TCCGCAAGAG GCCCAAAAGC GCAGCACTAT TTTCCATGTG
CAATTTAATG CCCCAGTTGA TGTTGCCAGC TTTGAAAAAC AGATCCTCTT GGGATTGGTC
GAAGGTAAAT CCAAGTCAGA GAAGAAACTT AATTTCTCCG TCGTTTATGA TGAGAAAAAG
CTTAATGCCT GGATACATTC GCAACCCTTG ATGCCAATGG ATAAAGGCGG TTCGGTCCAT
CTATCGATTA ATAAAGGGGT GAATGCCAGT GTTGCCGCCA CGCCTACGAC ACAGGCACAG
AATAAATGGG TATCCGTCCC TAACCTATAT AGCCTGGCGG TTAATAGTAT TAATGCCACG
TTGGTTGAGT CAGATAACAA TAATGGTGAG CGGGCCTTAA TTATTGCTAT CAGCGACGCG
GTTAAAGATA AAGAGATCAA AAATGCGGTC AAAGCCTGGT TACTGCCGCA ACATAATTTT
CAAGCGAAAG AGAGCGCCAA AACATCAACC GATTTCTATC CTTGGGATAT GGATGATATT
GACGATAATC TGCTGCAACA ATCAACGCCG CTGGCGCTGA CCCTCAATGA GGCCGAGCAA
GAGTATCAGC CAATATTCAG CTTTAAGTTT GATGCCCCTT CCTATCGCAC ACTGCTGATC
GAGGTTAACA ATAGCCTGAC ATCGGTGGGT GGTTATAAAA TGCCGGAAAA AATCTACCAA
ATAGTCAGGG TTCCCGATTA CCCTAAGACG CTGCGCTTTA TGTCACAAGG CTCGTTATTA
TCGATGCAGG GTGATAAGCA GATCAGCGTC GCCGCCCGTA ATATGACTGG CATGAAGCTG
GATATTAAGC GGGTTATTCC TAGCCAGTTA CAACATATTG TGTCATTTAA AAGCAGCGAA
TATTCATCAG CTCACTTTAA CCGCCTGAGT GATGAATATT TTACTGAACA CTTCCAGTAC
CAAACCGCGC TGAATAATGA CAACCCCGGC GAGATCAATT ATCAAGGGGT CGATCTGTCC
CGTTATCTTG CAAATAATCC GAGTGCTCGG CGTGGGGTGT TCTTACTTAC CCTGTCAGCT
TGGGATCCGG AGAAAAGGGA TAATCAGCAA CACAGCGAGG AAGACTACGA CGAAGACCAG
GAATGGGTCG GCGATTCACG CTTTGTGGTG ATCACGGACT TAGGCATTAT CACCAAGCAA
TCACAGGATA GATCCCGTGA TGTGTTCGTG CAATCCATTC ACTCGGGTCT GCCCACCGCC
GATGCCAAAG TCTCTGTGGT GGCAAAAAAT GGTGTGGTCT TACTGAGCCA AATCACCGAT
AGCAAAGGGC ATGTTCATTT TCCTGCGCTG GACGCCTTTA AAAATGAACG CCAACCGGTC
ATGTTCCTGG TGGAAAAAGA AGGGGATGTC TCCTTCCTGC CCACCCGAGC CACCTATGAC
CGTAACCTTG ATTTCTCACG TTTTGATATT GATGGCGAAG AGACACCGTC CGACCCACGG
ACTCTAAGCA GCTATCTGTT TTCTGACCGG GGAGTTTATC GCCCAGGCGA TCGCTTCAAT
ATTGGTCTGA TCACCCGGAC CGCCAACTGG GCTACCGCAC TCGATGGCGT CCCCCTGCGG
GCGGAGATCC GTGACCCACG TGATACCTTG ATGAGTACCC TGCCGATAAC CTTGGACAGC
AGTGGTTTCA ATGAGCTCAG CTATACGACC GGTGAAAACT CACCTACCGG TGAATGGAAC
GTCTATCTCT ATCTGGTTGG TAAGAATAAT GAAACGTCGA TGTTGCTGGG GCACACCACC
GTAAATGTTA AAGAGTTCGA GCCTGATCGC CTAAAAGTGC AACTGCAACT GACGCCAGAG
CGTCAACAAG GCTGGGTTAA ACCGCAGGAG CTGCAAGCCA ATATCAATGT ACAAAATTTA
TTCGGTACAC CAGCACAGGA GCGCCGTGTC ACCTCTAGAC TGATCTTGCG GCCAATGTAC
CCGAGTTTTG CCCCGTTCCC TGATTACCTG TTCTATGAGA ATCGTCATAA CAGCGATGGT
TTTGAGACTG AACTGGAAGA ACAAACGACC GATCTACAAG GGATGGCGAC CATCCCATTG
GATCTGAAAT CCTATGCTGA CGCCACCTAT CAACTGCAAT TGTTGTCGGA AGCCTTTGAA
GCGGGTGGAG GCCGCTCCGT GGCCGCGACT GCGCGGGTTC TGGTTTCACC TTACGACTCT
CTGGTTGGGG TGAAAGCCGA TGGCGATCTG AGTTATATCA ACCGTGATGC CGTGCGTAAG
CTGAATATTA TTGCTGTGGA CCCGAGCCTG AATAAAATTG CGCTGCCAGA CTTGAGTCTG
TCATTGATTG AGCAGAAGTA TATTTCAGTG CTAACCAAAC AGGATTCAGG CGTTTATAAA
TATCAATCAC GGCTAAAGGA GCAGTTGGTC TCAGAGCAAC CGCTAAAAAT CAGCCCGACA
GGGACGGATT TCACCCTAGT GACCCAGCAG CCTGGTGATT TTATTCTGGT GGTTAAGGAC
AGTCAGGGGC AGGTTCTGAA CCGTATTAGT TATACGGTGG CGGGTAACGC AAACCTGACC
CGCTCACTGG ATCGCAACAC CGAATTAAAG CTAAAACTGA ATCAGGCCGA ATATCTGCAA
GGCGAAGAAA TTGAGATTGC GATTAATGCA CCTTATGCCG GTAGCGGTCT GATCACGATA
GAAAAAGATA AAGTGTATAG CTGGCAGTGG TTCCACAGTG ATACCACCAG CTCTGTGCAG
AGAATCCGCA TCCCACCGGC AATGGAAGGC AATGGCTATA TCAACGTACA ATTCGTGCGT
GATGTGAATT CCGATGAGAT CTTTATGAGC CCACTGAGTT ACGGTGTAAT GCCATTTAAG
ATCAGTACCA AAGCGCGTCA GGCGGCTATC GAGTTAGCGT CGCCGTCAGT CATTAAACCG
GGTGAAGTGT TACCGATTAA AGTGACCACC GATTCACCAC AGCGCGTGGT GGTGTTTGCC
GTCGATGAAG GTATTTTGCA GGTGGCACGC TATCGCCTGA AAGATCCACT GGATTACTTC
TTCCGTAAAC GTGAACTGAG TGTACAGAGT GCACAAATTC TCGATTTGAT CCTGCCGGAA
TTCAGCAAGC TGATGGCACT GACCTCCGCA CCTGGAGGCG ACGCCGGGGA AGGGCTGGAC
CTGCACCTCA ATCCGTTTAA ACGCAAACAA GACAAGCCGG TGGCTTATTG GTCTGGTATC
ACCGAAGTGA ATGGTGAAAC CACCTTCAAT TACCCGATTC CCGACTATTT CAATGGTAAA
GTTCGCGTGA TGGCCATCTC TGCGACCCCT GATCGCATTG GTAAAGTCCA GACCTCGACC
ACCGTGCGGG ATAACTTTAT TCTGACGCCG AATGTCCCCG CGATGGTAGC ACCGGGAGAT
GAATTTGATG TCACCGTGGG TGTGAGTAAC AACCTGCAAG GATTGAAGGG TAAAGCGGTT
GATATCACCG TGCGTCTGAC ACCACCGCCA CAATTGGAAG TGGTGGGTGA AGCGCAACAC
AGCCTGTCGC TGGCAGAAAA ACGTGAAACG CTTGTCAGCT TCCGCCTACG CGCCCGTTCA
GCATTGGGTG ATGCTCCACT GGTGTTTGAT GCCAGCTATG GCTCTCAATC CAGCCGCCGG
ACGGTCAGTA CCTCGGTACG CCCGGCGATG CCATTCCGAA CGCAATCGGT GATGGGCCGG
ATGGAGGGTA ACAAGCATAC TGTGACCAAT CTGCGCCAGA TGTTTGATAA TTATGCTCAA
CGTCAGGCGA CCGCTTCCCA CTCACCGTTG GTCTTAACCC AAGGTCTGGC GCGGTACCTG
GCTGATTACC CGTACTACAG TTCTGAGCAA ATTGTCAGCC GCTCGATTCC GTTGATTATG
CAAAGCAAAC ATCCTGAAAT GGACAGTGCC CTCAATCAGA ATGAGGTCCG TGATCAACTG
AAAAACATGC TACGTATCCT GAGCTCTCGG CAGAATAGCA CTGGTGCAAT CGGTTTGTGG
CACGCCTCCC CTACCCCTGA TCCGTTTGTC ACACCTTATG TCGTGCAATT TCTGCTGGAA
GCGAAATCTG CCGGTTACAG CTTGCCGAAT GACATCTTGG AGGGGGCCAA CAACGCACTG
CGTCTGTTAG CGGCTCGACC TTATGATGAC CTTTACTCTC TGCGTTTGCG GGCCTTTGCT
GTTTACCTGT TGACCTTGCA GGGGGAGATC ACCACCAATA CTCTGGCATC GGTGCAAAGT
ACGTTACAGC AACTTTATCC TGACAGTTGG CAGACTGATC TGAGTGCCAT TTATCTGGCC
TCATCATACC GTCTGCTCAA AATGGATGAC GAAGCCAATA AACTGCTGCA ACCCACCTGG
AAACAACTGG GTAAAGCCTA CAGCAAGGCC TGGTGGACGC AGAATTATTT TGATCCACTG
GTGCAAGATG CAACCCGGTT GTATCTGATC ACTCGCCATT TCCCAGAGAA AGTCTCTTCT
ATTCCGCCAC AAGCACTGGA AAATATGGTG CTGGCACTGA GGGATGAGCA TTACACGACC
TATTCATCCG CGATGAGCAT TCTGGCACTG GAAAGTTACA CCAGCCAGGT AGCCGCCCAG
CAAGATACGC CAGAAACCCT GCAAATCATC GAGATCAGTA AAAGCAAAGG GATCGACCCT
AACGTTATCT CAACGCTGAA CGGCCTGTTC GTTCAAGGTG ATTTTACCGG TGAGGCTAAA
GCGATTCAGT TTAACAACTA TGCCTCGGCA CCCGCTTGGT ATGTGGTCAA TCAATCAGGC
TATGACCTTC AGCCACCAAA AGACGCCATC TCTAATGGGC TGGAAATCAG CCGCAGCTAC
ACCGATGAGC AGGGTAAGCC GGTGACCCAA GTCACCTTAG GGCAGAAAGT TAACGTGCAC
CTAAAAATCC GGGCTAACGC TAAACAAGGT CAAAATAATC TGGCGATTGT CGATCTACTG
CCGGGCGGTT TTGAAGTGGT ACAACAAACG GCACCTGAAC CAGAGTTTTA TGATAATCAG
GATGATCAGG ATGAGGAAAC TGGCAGCGGC TGGCAGTCGC CGCTAATGGT ATCTGGCTCC
AGTTGGTACC CTGACTACAG TGATATTCGT GAAGATCGCG TGATCATTTA TGGCAGTGCC
AGTACCGACG TTAAAGAGTT TATCTACCAA ATCAAATCAA CCAATACGGG TCGCTTTGTG
GTGCCACCGG CTTACGGCGA AGCCATGTAT GATCGTAATG TACAGGCGCT GTCGGTCGGT
AAAGGGCATA TCCTTGTCGT TCCACCTGAG GCAAAATAG
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| Protein sequence | MDLLRFLLIS PFALIKGLYR LSAYLLRLVG RLLRPVVGNL NWRAPQWMTK TANGLHCAFN
RSEQWVAKHP KGISAAIVLL MAAASAAFYG YHWYLNRPQP IEPAPMVYQE TSIRVSAPRT
VNYQAQKPEA QPLSLNFMHS AAPITAMGQV VDQGISLTPA IEGEWKWATE RTLVFTPKKA
WPMGANYQIT IDAEKLLAPQ IKLNQTELNF TTPAFAYQLE KAEYYQDPQE AQKRSTIFHV
QFNAPVDVAS FEKQILLGLV EGKSKSEKKL NFSVVYDEKK LNAWIHSQPL MPMDKGGSVH
LSINKGVNAS VAATPTTQAQ NKWVSVPNLY SLAVNSINAT LVESDNNNGE RALIIAISDA
VKDKEIKNAV KAWLLPQHNF QAKESAKTST DFYPWDMDDI DDNLLQQSTP LALTLNEAEQ
EYQPIFSFKF DAPSYRTLLI EVNNSLTSVG GYKMPEKIYQ IVRVPDYPKT LRFMSQGSLL
SMQGDKQISV AARNMTGMKL DIKRVIPSQL QHIVSFKSSE YSSAHFNRLS DEYFTEHFQY
QTALNNDNPG EINYQGVDLS RYLANNPSAR RGVFLLTLSA WDPEKRDNQQ HSEEDYDEDQ
EWVGDSRFVV ITDLGIITKQ SQDRSRDVFV QSIHSGLPTA DAKVSVVAKN GVVLLSQITD
SKGHVHFPAL DAFKNERQPV MFLVEKEGDV SFLPTRATYD RNLDFSRFDI DGEETPSDPR
TLSSYLFSDR GVYRPGDRFN IGLITRTANW ATALDGVPLR AEIRDPRDTL MSTLPITLDS
SGFNELSYTT GENSPTGEWN VYLYLVGKNN ETSMLLGHTT VNVKEFEPDR LKVQLQLTPE
RQQGWVKPQE LQANINVQNL FGTPAQERRV TSRLILRPMY PSFAPFPDYL FYENRHNSDG
FETELEEQTT DLQGMATIPL DLKSYADATY QLQLLSEAFE AGGGRSVAAT ARVLVSPYDS
LVGVKADGDL SYINRDAVRK LNIIAVDPSL NKIALPDLSL SLIEQKYISV LTKQDSGVYK
YQSRLKEQLV SEQPLKISPT GTDFTLVTQQ PGDFILVVKD SQGQVLNRIS YTVAGNANLT
RSLDRNTELK LKLNQAEYLQ GEEIEIAINA PYAGSGLITI EKDKVYSWQW FHSDTTSSVQ
RIRIPPAMEG NGYINVQFVR DVNSDEIFMS PLSYGVMPFK ISTKARQAAI ELASPSVIKP
GEVLPIKVTT DSPQRVVVFA VDEGILQVAR YRLKDPLDYF FRKRELSVQS AQILDLILPE
FSKLMALTSA PGGDAGEGLD LHLNPFKRKQ DKPVAYWSGI TEVNGETTFN YPIPDYFNGK
VRVMAISATP DRIGKVQTST TVRDNFILTP NVPAMVAPGD EFDVTVGVSN NLQGLKGKAV
DITVRLTPPP QLEVVGEAQH SLSLAEKRET LVSFRLRARS ALGDAPLVFD ASYGSQSSRR
TVSTSVRPAM PFRTQSVMGR MEGNKHTVTN LRQMFDNYAQ RQATASHSPL VLTQGLARYL
ADYPYYSSEQ IVSRSIPLIM QSKHPEMDSA LNQNEVRDQL KNMLRILSSR QNSTGAIGLW
HASPTPDPFV TPYVVQFLLE AKSAGYSLPN DILEGANNAL RLLAARPYDD LYSLRLRAFA
VYLLTLQGEI TTNTLASVQS TLQQLYPDSW QTDLSAIYLA SSYRLLKMDD EANKLLQPTW
KQLGKAYSKA WWTQNYFDPL VQDATRLYLI TRHFPEKVSS IPPQALENMV LALRDEHYTT
YSSAMSILAL ESYTSQVAAQ QDTPETLQII EISKSKGIDP NVISTLNGLF VQGDFTGEAK
AIQFNNYASA PAWYVVNQSG YDLQPPKDAI SNGLEISRSY TDEQGKPVTQ VTLGQKVNVH
LKIRANAKQG QNNLAIVDLL PGGFEVVQQT APEPEFYDNQ DDQDEETGSG WQSPLMVSGS
SWYPDYSDIR EDRVIIYGSA STDVKEFIYQ IKSTNTGRFV VPPAYGEAMY DRNVQALSVG
KGHILVVPPE AK
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