| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_3048 |
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| Symbol | |
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| ID | 6088298 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | - |
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| Start bp | 3349318 |
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| End bp | 3351264 |
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| Gene Length | 1947 bp |
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| Protein Length | 648 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 641598128 |
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| Product | thiamine pyrophosphate binding domain-containing protein |
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| Protein accession | YP_001721774 |
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| Protein GI | 170025269 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3962] Acetolactate synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCACCG TAAACATGGC GATGAAAACA GTACGGATGA CCATGGCACA GGCGCTGGTC
AGGTTTCTTA ATCAGCAATA TGTGGCCATT GATGGTCAGG AGGTCGCATT TGTCCACGGC
GTGATGACGA TTTTCGGGCA CGGCAATGTA CTCGGTATCG GCCAGGCTCT GGAAGAAAAT
CCGGGCCATT TACAGGTGCA TCAGGGCTGT AACGAGCAGG GCATGGCGCA TATGGCGATT
GGTTTTGCGA AACAGTATCG CCGTCAGCGT ATCTATGCCG TCAGTTCGTC TATCGGGCCG
GGAGCCGCCA ATATGGTCAC CGCAGCGGCC ACCGCCACGG CAAACCGCAT TCCGCTGCTG
CTATTGCCGG GGGATATCTA CGCCAGCCGT CAGCCTGACC CGGTGTTACA GCAGATCGAG
CAATATCACG ACCTTAGTAT TAGCACTAAC GATTGCTTCC GCCCGGTATC ACGTTACTGG
GATCGCATTA ATCGCCCTGA GCAATTGATG AGCGCCATGC TGAGTGCTAT GCGAGTACTG
ACTGACCCGG CGGATACCGG TGCGGTGACC CTTTGTCTGC CTCAGGATGT GCAGGGCGAA
GCGTGGGATT ACCCGGCGAG CTTCTTTGAG CGCCGGGTGC ATCGTATCGA GCGCCGTCCA
CCGGATACGC GCAGGCTTTC TGATGCGCTC AGCCTGATCG CCCGTAAACG CCGCCCGCTG
GTGGTGTGTG GCGGCGGCGT GCGCTATTCG GGGGCGCATG AGGCGTTTCG TGCATTTGTG
GAAAACGCTC AATTACCCTT TACTGAAACC CAAGCGGGCA AAGGGGCGCT GCCAAGTGAT
CATCCCCTCA ACTTGGGGGG AATTGGTGTC ACTGGCGGGT TGGCCGCTAA CCGGTTAGCT
CCACAGGCTG ATCTGGTGAT CGGCATCGGT ACCCGGCTCA CCGATTTCAC TACGGGTTCC
AAAGCACTAT TTTCTCACCC GGAGGTGGCG TTTTTGCTGC TTAACGTGGC GGAATTCGAT
GCGCTTAAAC TGGATGCCAC GGCCCTGATT GCCGATGCGC GGGTGGGGCT TGAGGCATTA
ACCGAAGGGC TGACAGGTTA TCGCACCGCT TGGCAGGGCG ATATCATTGA GGCCAAAGCA
GCGTGGCGCG ACGAATGTCA ACGGCTTTGG TCACGCACCT GGCGGCCTGA TGAGGTGCCA
GAGGTGGCCG GTCATCTTGA TGATTCGCTA CAAGAATACG CCGAGGTGCT CAATACCACA
CTGACCCAGA CTCGGGTACT TGGGCTTATC AACCAGCATA TTGAAGACGA TGCCATTGTC
GTGGGGGCGG CGGGGTCGCT GCCGGGGGAT TTACAGCGTC TATGGCAGGT AAAAACGGCA
GACACCTATC ATCTTGAATA CGGTTATTCA TGCATGGGCT ATGAAATCGC TGCCGCCATC
GGGGCGAAAA TTGCGATGCC ACATCAACCG GTGTACGCCA TGGTGGGTGA TGGCTCCTAT
ATGATGCTGC ATTCCGAGCT GCACACGGCG GTACAAGAGG GGCTAAAAAT TACCGTCCTA
CTGTTTGATA ACGCCGGATT CGGCTGTATC AACAACCTGC AGATGGGTCA CGGGATGAGC
AGTTTTTGTA CCGAGAGCCG CCACCGTAAC CACGAGTCGG GGCAACTCAA TGGCCCATTG
ATTCGCGTTG ATTTCGCCCA AAACGCCGAA AGTTATGGCT GCCGCGCCTG GCGGGTGCAC
GATGAACCAA GCCTGCTAGC GGCATTGGCA GCATCCCGCG ATCATCCGGG GCCGGTGCTA
CTGGATATTA AAGTCTTGCC GAAAAGCATG ACGCACGATT ATGCGTCTTG GTGGCGTACT
GGCGATGCGC AAATCGCCCG TTCACCCGCG GTACAGCAGG CTGCAGAGCG AACCCAGATG
AAGGTAAAAC GTGCCCGTCA GTACTAA
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| Protein sequence | MSTVNMAMKT VRMTMAQALV RFLNQQYVAI DGQEVAFVHG VMTIFGHGNV LGIGQALEEN
PGHLQVHQGC NEQGMAHMAI GFAKQYRRQR IYAVSSSIGP GAANMVTAAA TATANRIPLL
LLPGDIYASR QPDPVLQQIE QYHDLSISTN DCFRPVSRYW DRINRPEQLM SAMLSAMRVL
TDPADTGAVT LCLPQDVQGE AWDYPASFFE RRVHRIERRP PDTRRLSDAL SLIARKRRPL
VVCGGGVRYS GAHEAFRAFV ENAQLPFTET QAGKGALPSD HPLNLGGIGV TGGLAANRLA
PQADLVIGIG TRLTDFTTGS KALFSHPEVA FLLLNVAEFD ALKLDATALI ADARVGLEAL
TEGLTGYRTA WQGDIIEAKA AWRDECQRLW SRTWRPDEVP EVAGHLDDSL QEYAEVLNTT
LTQTRVLGLI NQHIEDDAIV VGAAGSLPGD LQRLWQVKTA DTYHLEYGYS CMGYEIAAAI
GAKIAMPHQP VYAMVGDGSY MMLHSELHTA VQEGLKITVL LFDNAGFGCI NNLQMGHGMS
SFCTESRHRN HESGQLNGPL IRVDFAQNAE SYGCRAWRVH DEPSLLAALA ASRDHPGPVL
LDIKVLPKSM THDYASWWRT GDAQIARSPA VQQAAERTQM KVKRARQY
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