| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_3031 |
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| Symbol | cspE |
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| ID | 6089244 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | - |
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| Start bp | 3332316 |
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| End bp | 3332525 |
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| Gene Length | 210 bp |
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| Protein Length | 69 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641598111 |
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| Product | cold shock protein CspE |
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| Protein accession | YP_001721757 |
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| Protein GI | 170025252 |
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| COG category | [K] Transcription |
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| COG ID | [COG1278] Cold shock proteins |
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| TIGRFAM ID | |
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| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.036334 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCTAAGA TTAAAGGTAG CGTTAAGTGG TTCAATGAAT CCAAAGGTTT CGGCTTCATT
ACCCCAGAAG ATGGTAGCAA GGACGTTTTT GTTCATTTTT CTGCCATCGC TAGCAATGGT
TTCAAAACGC TTGCTGAAGG CCAGCGTGTA GAATTTGAAA TCACGAACGG TGCCAAAGGG
CCATCTGCTG CTAATGTTAT CGCTATCTAA
|
|---|
| Protein sequence | MSKIKGSVKW FNESKGFGFI TPEDGSKDVF VHFSAIASNG FKTLAEGQRV EFEITNGAKG
PSAANVIAI
|
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| |