Gene YPK_3024 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_3024 
Symbol 
ID6088502 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp3326771 
End bp3327973 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content49% 
IMG OID641598104 
ProductD-alanyl-D-alanine carboxypeptidase fraction A 
Protein accessionYP_001721750 
Protein GI170025245 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1686] D-alanyl-D-alanine carboxypeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000000298829 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATATG TAATTACCTC TCGCATTATC AAGAGCCTAG CGCTCGGCAC TGTTATTGTC 
ATGAGCGCTG CTAACGCTGA TGACGTCAAT CTGAAAACCA TGATCCCCGG CGTACCGCAG
ATCGACGCAG AAGCCTACAT CCTAATTGAT TACAACTCCG GGAAAGTATT GGCGGAAATG
AACGCGGATA CGCGCCGCAA CCCAGCCAGT TTGACCAAAA TGATGACCAG CTACGTCATC
GGCCAGGCGA TTAAATCAGG GAAAATCGGG GCTGAAGACA TGGTCACCGT GGGTAAAGAT
GCCTGGGCTA CCGGTAACCC GGAATTTAAA GGCTCCTCCC TGATGTTTCT GAAACCGGGC
GACCGTGTGC CGGTGTCTAA ACTGACCCGT GGTATCAACT TACAATCGGG TAACGATGCC
TGCGTCGCGA TGGCCGATTA TGTCGCGGGG AGTCAGGACT CATTCGTTAA CCTGATGAAC
AACTATGTTA AGGCGCTGGG CTTACAAAAT ACCCACTTCA AAACTGTTCA CGGTTTAGAT
GCGGAAGGCC AGTTCAGCTC TGCACGCGAT ATGGCATTGA TTGGTCAAGC CCTGATCCGT
GATGTGCCAG ATGAGTATGC TATCTATAAA GAGAAAGAGT TTACCTTCAA CAATATCCGC
CAGACAAACC GTAACGGTTT ACTGTGGGAC ACCAGTTTGA ACGTAGATGG CATCAAAACC
GGTCACACCG AGGCAGCAGG TTATAATCTG GTCGCATCAG CGACTGATGG ACAGATGCGT
TTGATTTCAG TCGTTTTAGG CGGCCATACC TTTAAGGGCC GTGAAACTGA AAGTAAAAAA
CTGCTGACCT GGGGCTTCCG TTTCTTTGAA ACCGTCGCGC CGCTGAAAGT CGGTAAAGAG
TTTGCCTCAG AACCGGTCTG GTTTGGCGAT AGTGATCGTG TGCAGTTAGG TGTAGATAAA
GATGCTTATC TGACTATTCC ACGTGGCCGA ATGAAAGACC TGAAAGCCAG CTATGTGCTG
AATACACCTG AAATTCATGC GCCACTGGCG AAAAACCAAG TTGTGGGAAC CATTAACTTC
CAGTTAGATG GTAAAACCAT CGATCAGCGC CCATTGGTGG TGATGAACGA AGTAAAAGAA
GGTGGTTTCT TCAGCCGTAT GGTGGATTAT ATCAAACTGA TGTTCCACCG CTGGTTCGGC
TAA
 
Protein sequence
MKYVITSRII KSLALGTVIV MSAANADDVN LKTMIPGVPQ IDAEAYILID YNSGKVLAEM 
NADTRRNPAS LTKMMTSYVI GQAIKSGKIG AEDMVTVGKD AWATGNPEFK GSSLMFLKPG
DRVPVSKLTR GINLQSGNDA CVAMADYVAG SQDSFVNLMN NYVKALGLQN THFKTVHGLD
AEGQFSSARD MALIGQALIR DVPDEYAIYK EKEFTFNNIR QTNRNGLLWD TSLNVDGIKT
GHTEAAGYNL VASATDGQMR LISVVLGGHT FKGRETESKK LLTWGFRFFE TVAPLKVGKE
FASEPVWFGD SDRVQLGVDK DAYLTIPRGR MKDLKASYVL NTPEIHAPLA KNQVVGTINF
QLDGKTIDQR PLVVMNEVKE GGFFSRMVDY IKLMFHRWFG