| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_3023 |
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| Symbol | |
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| ID | 6088328 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | + |
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| Start bp | 3325286 |
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| End bp | 3326368 |
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| Gene Length | 1083 bp |
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| Protein Length | 360 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641598103 |
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| Product | rare lipoprotein A |
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| Protein accession | YP_001721749 |
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| Protein GI | 170025244 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[S] Function unknown |
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| COG ID | [COG0797] Lipoproteins
[COG3147] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR00413] rare lipoprotein A |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.000107975 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCGTAAGG AATGGCTTTG GGTCGGCATC GCAAGTGTGC TGCTATCAGC ATGTATTGAT
CAGCCTCCGG CCCCCCAGCA ACAAGTACAA CAAACCTACA GCGGCCCAGT TGAAGAAATT
GGCGGGGCAG AACCGCGCTA CGAACCTTTT AATCCTAACG TTAATCAGGA TTATAAAGTT
AATGGCCAGT CCTACCGTAT TATCAAAGAT CCGCAGAATT TCTCTCAGAT AGGGCTTGCT
TCTTCATATG GTGAAGAGGC ACGTGGCAAT ACCACGGCAA CCGGAGAAAT TTTTGATCCC
AATGCCTTGA CCGCCGCTCA CCCTACTCTG CCAATCCCAA GCTATGTCCG GGTAACTAAC
GTCAGTAATG GCCGCCAAAT TGTGGTTCGT GTGAATGATC GCGGCCCCTA CACGCCGGGC
CGTGTGATTG ATTTATCCAG AGCAGCTGCA GATCGCTTAA ATATTTCTAA CAATACCAAG
GTGAAGATAG ATTTTATCAA TGTCGCCCCT GATGGCTCGC TGTCTGGCCC TGGTATGGTA
GGCACCACCA TCGCGAAACA AAGTTATGCG TTACCCAGCC GCCCGGACCT AACATCAAGC
GGGATAGGTA CGCCGATGCA ACAAGATGCC CCAGCAACCG GTGCCGCTGT ACAGGCGATT
GATAACAGCC AGTTATCGGG TACTGATGCC ACGCAACCCG TCGCATCACA AAGTAGTGGT
TTCCTAAGAG CGCCCACGTC AGTCCCTGCG GGTGTGCTGG AAAGCTCGGA GCCAGTGATA
GATTCAGCGC CAGTCACCCC CCCTGTGGTC GCCAATCCCG GCCCGGTCAC TACAACACCA
ACATCCAGCG CGATATCAGG CGGTTATGTC GTTCAGGTCG GTGCACTGAG CGATGCTCAG
CGAGCACAGA CTTGGCAACA AAGCCTAAGC CAACGTTTTG GTGTTCCGGG TAAAGTGTCC
AACAGTGGCA GCATATACCG TGTTCAGCTA GGGCCTTTCA GTCATCGTCA ACAAGCGGTT
GATCTGCAAC AACGCCTCTC AAATGAAGCA CAGCAGCAAT CCTTTATCGT GGCAGCGCCC
TAA
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| Protein sequence | MRKEWLWVGI ASVLLSACID QPPAPQQQVQ QTYSGPVEEI GGAEPRYEPF NPNVNQDYKV
NGQSYRIIKD PQNFSQIGLA SSYGEEARGN TTATGEIFDP NALTAAHPTL PIPSYVRVTN
VSNGRQIVVR VNDRGPYTPG RVIDLSRAAA DRLNISNNTK VKIDFINVAP DGSLSGPGMV
GTTIAKQSYA LPSRPDLTSS GIGTPMQQDA PATGAAVQAI DNSQLSGTDA TQPVASQSSG
FLRAPTSVPA GVLESSEPVI DSAPVTPPVV ANPGPVTTTP TSSAISGGYV VQVGALSDAQ
RAQTWQQSLS QRFGVPGKVS NSGSIYRVQL GPFSHRQQAV DLQQRLSNEA QQQSFIVAAP
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