| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_3013 |
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| Symbol | |
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| ID | 6090781 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | + |
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| Start bp | 3314481 |
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| End bp | 3315206 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641598093 |
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| Product | ABC transporter related |
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| Protein accession | YP_001721739 |
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| Protein GI | 170025234 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1126] ABC-type polar amino acid transport system, ATPase component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATTTCCC TGAAGAATGT TTCTAAATGG TATGGTCAAT TTCAGGTGCT GGCTGACTGT
ACTACTGAAG TCAAAAAAGG TGAGGTAGTC GTCGTTTGTG GTCCTTCAGG CTCAGGCAAA
TCAACCTTAA TTAAAGTGGT GAATGGATTA GAACCTATCC AAGAAGGCAA TATTACGGTT
AATGGGATTG CTGTTAATGA TAAGGGCACT AATCTGGCGC AACTGCGTTC CAAGGTTGGT
ATGGTGTTCC AACATTTTGA GCTATTCCCA CACCTCTCGA TCATTGAAAA CCTGACACTG
GCGCAAATCA AAGTGCTCAA ACGCGATAAG GCAGAAGCCC TTGAGAAAGG CTTGAAATTA
TTAGAGCGTG TCGGTCTTTC TACCCATGTA GATAAATATC CATCCCAATT ATCTGGCGGC
CAACAGCAAC GGGTAGCGAT TGCCCGCGCT CTTTGCATGG ACCCTATCGC TATGCTGTTT
GATGAACCAA CCTCAGCGCT TGATCCAGAA ATGATCAATG AAGTGCTGGA TGTCATGGTC
AAACTGGCGC TGGAGGGAAT GACCATGATG GTGGTAACCC ACGAAATGGG CTTCGCCCGC
AAAGTGGCTA ACCGGGTTAT TTTCATGGAT GAAGGGAAGA TTGTCGAAGA CAGCGATAAA
GATGATTTCT TTAATAATCC TAAATCTGAC CGCGCCAAGG ACTTCCTGGC TAAAATCTTG
CATTAA
|
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| Protein sequence | MISLKNVSKW YGQFQVLADC TTEVKKGEVV VVCGPSGSGK STLIKVVNGL EPIQEGNITV
NGIAVNDKGT NLAQLRSKVG MVFQHFELFP HLSIIENLTL AQIKVLKRDK AEALEKGLKL
LERVGLSTHV DKYPSQLSGG QQQRVAIARA LCMDPIAMLF DEPTSALDPE MINEVLDVMV
KLALEGMTMM VVTHEMGFAR KVANRVIFMD EGKIVEDSDK DDFFNNPKSD RAKDFLAKIL
H
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