| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_3012 |
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| Symbol | |
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| ID | 6090219 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | + |
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| Start bp | 3313807 |
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| End bp | 3314481 |
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| Gene Length | 675 bp |
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| Protein Length | 224 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641598092 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_001721738 |
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| Protein GI | 170025233 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.438164 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTACGAAT TTGATTGGAG TTCCATCGCC CCCAGCCTGC CCTATCTGCT GCAAGGCTTG
ATTGTAACTG TCAAAATAAC CCTCATCGCC ATTGTGTTCG GGATCCTCTG GGGAACAATT
TTGGCAGTGA TGCGCCTGTC ACCGATTAAA GCCATCAGCT GGTTTGCAAC TGCTTATGTT
AACGTGTTCC GCTCTATTCC GTTGGTCATG GTGCTGTTGT GGTTTTATTT AGTGGTGCCA
GGCTTCTTAC AAAATGTGCT GGGCTTATCA CCAAAAACTG ATATTCGGTT GATCTCAGCC
ATGGTAGCCT TTTCGCTGTT CGAAGCCGCC TATTACTCGG AAATTATCCG GGCCGGGATC
CAAAGTATTT CTCGTGGGCA ATCCTCTGCG GCATTGGCGT TAGGGATGAC TCAGGGTCAA
TCAATGAGAC TGGTTATCCT GCCACAAGCT TTCCGGGCCA TGGTGCCGCT ACTGTTAACT
CAGGGGATAG TATTATTTCA GGATACGTCA CTGGTATATG TCCTTAGCCT GGCCGATTTC
TTCCGTACAG CCACCACCAT CGGCGAACGG GACGGCACGC AGGTCGAAAT GGTACTGTTT
GCCGGTTTAG TTTATTTCGT TATCAGCATT TCCGCGTCAA TGCTGGTTAA CTATTTGAAG
AAAAGGACTG TTTGA
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| Protein sequence | MYEFDWSSIA PSLPYLLQGL IVTVKITLIA IVFGILWGTI LAVMRLSPIK AISWFATAYV
NVFRSIPLVM VLLWFYLVVP GFLQNVLGLS PKTDIRLISA MVAFSLFEAA YYSEIIRAGI
QSISRGQSSA ALALGMTQGQ SMRLVILPQA FRAMVPLLLT QGIVLFQDTS LVYVLSLADF
FRTATTIGER DGTQVEMVLF AGLVYFVISI SASMLVNYLK KRTV
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