| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_2996 |
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| Symbol | |
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| ID | 6090234 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | - |
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| Start bp | 3293958 |
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| End bp | 3295991 |
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| Gene Length | 2034 bp |
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| Protein Length | 677 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641598071 |
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| Product | PTS system, N-acetylglucosamine-specific IIBC subunit |
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| Protein accession | YP_001721723 |
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| Protein GI | 170025218 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1263] Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific
[COG1264] Phosphotransferase system IIB components
[COG2190] Phosphotransferase system IIA components |
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| TIGRFAM ID | [TIGR00826] PTS system, glucose-like IIB component
[TIGR00830] PTS system, glucose subfamily, IIA component
[TIGR01998] PTS system, N-acetylglucosamine-specific IIBC component |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTATTC TTGGTTACTT ACAAAAAGTA GGTCGAGCGT TGATGGTCCC TGTGGCCACA
CTGCCTGCGG CCGCGATATT GATGGGTGTA GGCTACTGGA TAGACCCAGT CGGTTGGGGG
GCTGATAATG CACTGGCGGC ATTATTCATC AAATCTGGTG CTGCAATAAT CGAAAACATG
TCGGTACTAT TCGCAATTGG TGTTGCTTAC GGTATGTCAA AAGATAAAGA CGGTGCTGCG
GCACTGACCG GTTTTGTAGG TTTCCTGGTA TTAACCGCGC TGTGTTCGCC AGCAGCGGTT
TCGATGATCA AACAGATTCC ACTTGATCAA GTCCCTGCCG CATTTGGCAA AATCGAAAAC
CAGTTCGTGG GTATTTTGGT CGGTATTATC TCTGCTGAGC TTTATAACCG TTTCAGCGGC
GTTGAACTGC CAAAAGCGCT CTCTTTCTTC AGTGGTCGTC GTTTGGTTCC AATCTTGACG
TCCTTCCTGA TGATCGCAGT GGCCTTTATG CTGATGTACA TATGGCCACT GATTTATAAC
GCATTAGTGA CCTTCGGTGA ATACATCAAA GATCTGGGTT CTGTTGGTGC GGGTATCTAT
GCTTTCTTCA ACCGCTTACT GATCCCTGTT GGTCTGCATC ACGCTCTGAA CTCGGTGTTC
TGGTTTGACG TCGCTGGGAT TAACGATATT CCTAACTTCC TCGGTGGCCA AGAATCGATC
AATAAAGGCA CCGGCATTGT CGGTATCACT GGCCGTTATC AGGCAGGTTT CTTCCCGATT
ATGATGTTTG GTTTACCGGG TGCTGCGTTG GCAATTTACC ACTGCGCACG TCCAGAAAAT
AAAGCAAAAG TGGCAGGTAT CATGATGGCG GGGGCATTTG CAGCCTTCTT CACGGGTATC
ACTGAACCTC TTGAATTCTC CTTCATGTTT GTGGCACCTG TGCTGTACTT CTTGCACGCC
GTGCTGACCG GTATTTCCGT GTTCATCGCC GCCAGCATGC ATTGGATCGC GGGCTTTGGT
TTCAGTGCCG GTTTAGTGGA TATGGTGCTC TCTTCCCGTA ACCCGTTGGC TACGCAATGG
TACATGCTGA TCCCACAAGG TCTGATATTC TTTGTGATTT ACTACTTAGT ATTCCGTTTC
ACTATCCAGA AATTCAACTT ATTGACACCT GGCCGTGAGC TGGCGGTGGA AGGCAGTGAA
GAAGATGGTT ACGACGTAAA TGTTGATAAA ACGCCAGCAG TGAATGAAAG TGAAATCAAT
GGCCTTGCTC GTCGTTATAT TGGTGCCATC GGTGGTTCAG ACAACCTGAC GGCCATTGAT
GCCTGCATTA CCCGCCTACG CCTGAATGTT AAAGATTCAG CCTTGGTTAA TGACAGTGTA
GCTAAACGAT TAGGGGCTTC AGGTGTTATT CGTCTGAATA AGCAAAGTGT ACAAATTATC
GTTGGTACTC GTGCAGAACT GATTGCCGCA GCAATGCGCA CTGTGCTGGC GGGGGGCCCA
ATCCCCGCGG CAAGCAGCAA TGCTGCGCCT ACGGGTGCAA GACCGCAGGC GGTCATTAAC
TCCGCGAAAA CGGCTTCTTT AGTTCTGGTT TCGCCCATTA CCGGTGATGT TGTGCCATTG
GCGCAGGTTC CTGATGAGGC TTTTGCTAGC AAAGCGGTAG GTGAGGGGGT TGCTATCCGT
CCTACAGACA AAATAGTTGT TTCTCCCGCT AGCGGCACTA TTGTGAAAAT CTTCAATACG
GATCATGCGT TCTGCCTGGA AACGGAAACC GGTGCTGAGA TTGTGGTTCA TATCGGGATT
GATACCGTGA AGCTTAACGG CCAGGGCTTT ACCCGTTTAG TTGAAGAGGG GACGACAGTG
GTTGCTGGTC AGCCGGTGTT AGAACTGGAT CTGGCTTATC TGAATGCCAA CGCGCATTCA
ATGATCAGCC CAGTTGTCGT CAGTAATATT GATGACTACG CGGGGATCTC GCTGTTGGCG
AGCGGTTCAG TCGTTGCCGG TCAAAGCCAA TTATTTGAGA TTCGTGGCAA ATAA
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| Protein sequence | MSILGYLQKV GRALMVPVAT LPAAAILMGV GYWIDPVGWG ADNALAALFI KSGAAIIENM
SVLFAIGVAY GMSKDKDGAA ALTGFVGFLV LTALCSPAAV SMIKQIPLDQ VPAAFGKIEN
QFVGILVGII SAELYNRFSG VELPKALSFF SGRRLVPILT SFLMIAVAFM LMYIWPLIYN
ALVTFGEYIK DLGSVGAGIY AFFNRLLIPV GLHHALNSVF WFDVAGINDI PNFLGGQESI
NKGTGIVGIT GRYQAGFFPI MMFGLPGAAL AIYHCARPEN KAKVAGIMMA GAFAAFFTGI
TEPLEFSFMF VAPVLYFLHA VLTGISVFIA ASMHWIAGFG FSAGLVDMVL SSRNPLATQW
YMLIPQGLIF FVIYYLVFRF TIQKFNLLTP GRELAVEGSE EDGYDVNVDK TPAVNESEIN
GLARRYIGAI GGSDNLTAID ACITRLRLNV KDSALVNDSV AKRLGASGVI RLNKQSVQII
VGTRAELIAA AMRTVLAGGP IPAASSNAAP TGARPQAVIN SAKTASLVLV SPITGDVVPL
AQVPDEAFAS KAVGEGVAIR PTDKIVVSPA SGTIVKIFNT DHAFCLETET GAEIVVHIGI
DTVKLNGQGF TRLVEEGTTV VAGQPVLELD LAYLNANAHS MISPVVVSNI DDYAGISLLA
SGSVVAGQSQ LFEIRGK
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