Gene YPK_2986 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_2986 
Symbol 
ID6088880 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp3282651 
End bp3283418 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content49% 
IMG OID641598061 
Producthypothetical protein 
Protein accessionYP_001721713 
Protein GI170025208 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.33197 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTAA ATTTCCGCTT ACAAAACGCA CCGTCCCCTA CCTCAGCCCT GCCAATCATT 
CTGATCCATG GATTATTCGG CAATTTGGAT AATCTAGGTG TATTGGCTCG CGATCTGCAG
CAACACCATA ATGTTATTCA GGTCGATTTA CGTAACCATG GCTTATCTCC CCGTGCACCA
CAGATGGATT ATCCCGTAAT GGCGCAGGAT GTGTTGGCGT TAATGGATGA ACTGGCAATA
ACACAAGCCA TTATTATCGG CCATTCCATG GGCGGAAAAG TGGCGATGGC AATGACCGCG
CTTGCCCCAA ATCGGGTTGA AAAACTGGTA GCGATCGATA TTGCGCCAGT GAATTATCAG
GTACGCCGTC ATGACACTAT TTTCGCCGCG CTTAATGCTG TGAGTGCCGC TGGTGTGACT
CAGCGCAACG AAGCCGCTCA ACTGATGCGC ACGTTAATAA AAGAAGAAGG GGTTATTCAG
TTCTTACTAA AATCATTTCA GGGCGGTGAA TGGCGATTTA ATGTCCCTGC CCTCTGGGAT
CAGTACGAGA ACATTATTGG CTGGCAGCCC ATTCCCCCTT GGCCACATCC TATTTTGTTT
ATCCGTGGTG AGTTATCTCC TTATATTCAA GACAGCTATC GAGATGATAT TGCCCGTCAG
TTCCCACAAG CCCGTGCGCA TGTCGTCGCC GGAACCGGTC ATTGGGTCCA TGCGGAAAAA
CCAGATTCTG TGTTGCGGGC AATCCACCGT TTCCTTGATG CCGCATAA
 
Protein sequence
MKLNFRLQNA PSPTSALPII LIHGLFGNLD NLGVLARDLQ QHHNVIQVDL RNHGLSPRAP 
QMDYPVMAQD VLALMDELAI TQAIIIGHSM GGKVAMAMTA LAPNRVEKLV AIDIAPVNYQ
VRRHDTIFAA LNAVSAAGVT QRNEAAQLMR TLIKEEGVIQ FLLKSFQGGE WRFNVPALWD
QYENIIGWQP IPPWPHPILF IRGELSPYIQ DSYRDDIARQ FPQARAHVVA GTGHWVHAEK
PDSVLRAIHR FLDAA