Gene YPK_2981 details

Gene Information

• Locus tag: YPK_2981
• ID: 6088291
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Yersinia pseudotuberculosis YPIII
• Kingdom: Bacteria
• Replicon accession: NC_010465
• Strand: +
• Start bp: 3280416
• End bp: 3280946
• Gene Length: 531 bp
• Protein Length: 176 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 641598056
• Product: phage integrase family protein
• Protein accession: YP_001721708
• Protein GI: 170025203

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 0.551664
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCGCGGA CTACACGCCC CCTCACCCAC ACCGAAGTAC AAAAAGCAAA AACCACCGAC 
AAAGACCTAA CCCTCCATGA TGGTGATGGT TTATTTCTGT TAGTCAAAAC TACCGGCAAG 
AAAATTTGGC GTTTCCGCTA TCAGCTTCCC AACAGTAGTA AACGCACTAT GGTAAGCCTT 
GGCGCGTACC CTGCACTTTC TTTGGCTGAT GCCAGAGAAG TACGAGCCGA GAAACTGGCC 
ATGTTAGTGC GAGGGGTTGA TCCCCAAGCA AGAGCTGATG AAGAAGCTGA AAAGCTCCAG 
ATAGCGGAGG AAAGCATTTT TGTGAATGTC GCCCGCAAAT GGTTCGAGTT GAAAGAAAGC 
CACATTAGCG CAGCCCATGC GAAAGATATT TGGCGTTCTA TTGAAAAAGA CATCTTACCC 
AGCATCGAAA GTGTTCCCAT CCAAGAATTA AAAGCACGTA CCCTGATTCA GGTGTTAGAA 
CCCATCAAAG CACGGGGAGC ATTAGAGACT GACCTGCTCC CCATTGATTA A 

 

Protein sequence

MARTTRPLTH TEVQKAKTTD KDLTLHDGDG LFLLVKTTGK KIWRFRYQLP NSSKRTMVSL 
GAYPALSLAD AREVRAEKLA MLVRGVDPQA RADEEAEKLQ IAEESIFVNV ARKWFELKES 
HISAAHAKDI WRSIEKDILP SIESVPIQEL KARTLIQVLE PIKARGALET DLLPID