Gene YPK_2979 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_2979 
Symbol 
ID6087397 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp3278744 
End bp3279178 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content44% 
IMG OID641598054 
Producthypothetical protein 
Protein accessionYP_001721706 
Protein GI170025201 
COG category[I] Lipid transport and metabolism 
COG ID[COG2867] Oligoketide cyclase/lipid transport protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.587752 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCACAGA TTAGCCGATC TGCACTGGTT CCGTTCAGTG TAAAACAGAT GTATCAACTC 
GTTAATGATG TTCGTTCTTA CCCAGAGTTT TTACCCGGTT GTACCGGTAG CCGGGTACTT
GATGCCACTG AAAATGAAAT GATAGCCGCC GTGGATGTCG CCAAGGCCGG GATAAGTAAA
ACATTTACTA CACGCAATAC GCTAACAGAT AACCAGAGTA TCAATATGCA GTTGGTGGAT
GGGCCGTTTC GTAAATTAAT GGGCGGATGG CATTTTACAC CACTAAGTGC AGATGCTTGC
AAAGTTGAAT TGCATCTTGA TTTTGAATTT ACAAATAAGC TGATTGAATT GGCATTCGGT
AAAATATTCA AGGAGTTGGC TGGGAATATG GTGCAGGCTT TCACTCAACG GGCTAAAGAG
GTCTACAGTG CCTGA
 
Protein sequence
MPQISRSALV PFSVKQMYQL VNDVRSYPEF LPGCTGSRVL DATENEMIAA VDVAKAGISK 
TFTTRNTLTD NQSINMQLVD GPFRKLMGGW HFTPLSADAC KVELHLDFEF TNKLIELAFG
KIFKELAGNM VQAFTQRAKE VYSA