Gene YPK_2977 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_2977 
Symbol 
ID6088564 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp3277976 
End bp3278317 
Gene Length342 bp 
Protein Length113 aa 
Translation table11 
GC content46% 
IMG OID641598052 
Producthypothetical protein 
Protein accessionYP_001721704 
Protein GI170025199 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2913] Small protein A (tmRNA-binding) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.140554 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCTGTA AAATGCTGAC TGCCGCCGCT GTGATGCTTG CAATGCTTAC TGCGGGTTGT 
TCAACGTTGG AGAAGGTGGT CTACCGGCCT GATATTAATC AGGGTAACTA TTTATCACCT
ATTGATGCCT CCAAAATTCA TAAAGGTATG ACACAGCAAC AAGTGGCGTA TACCTTAGGC
ACGCCGATGC TACAAGATCC GTTTGGCACT CAAACCTGGT TCTACGTTTT CCGCCAACAA
CCTGGTCACG AAAAAATAAC GCAACAAACG TTAACGTTGA CCTTTGATAG CAGTGGTGTA
CTGACTGATA TCAAAAATGA GCCCGCGTTA ACCGGAAGCT AA
 
Protein sequence
MRCKMLTAAA VMLAMLTAGC STLEKVVYRP DINQGNYLSP IDASKIHKGM TQQQVAYTLG 
TPMLQDPFGT QTWFYVFRQQ PGHEKITQQT LTLTFDSSGV LTDIKNEPAL TGS