Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_2973 |
Symbol | gltA |
ID | 6087804 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | + |
Start bp | 3273143 |
End bp | 3274423 |
Gene Length | 1281 bp |
Protein Length | 426 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641598048 |
Product | type II citrate synthase |
Protein accession | YP_001721700 |
Protein GI | 170025195 |
COG category | [C] Energy production and conversion |
COG ID | [COG0372] Citrate synthase |
TIGRFAM ID | [TIGR01798] citrate synthase I (hexameric type) |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.00618343 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTGACA AAAAAGCGAC GCTGAATTTA GGCGAAGCTG CGATCGAACT GGGTGTCCTA TCCCCAACCC TCGGCACTGA CGTGATCGAC GTCCGCACCT TAGGTTCTAA AGGTTATTTT ACCTTTGACC CCGGTTTTAC CTCTACCGCA TCCTGCGAAT CAAAAATCAC CTATATTGAT GGTGATCAGG GTATTTTGCT GCACCGTGGC TTCCCGATTG CCCAGTTGGC AAAAGATTCT ACTTATCTGG AAGTTTGTTA CATTCTGCTG TACGGCGAAA CACCTACGCC AGAAGAGTAC AAAACGTTCA AAACCACAGT GACCCGACAT ACCATGATCC ACGAGCAGAT CACCCGTCTG TTCCATGGTT TCCGCCGCGA TTCACATCCG ATGGCCGTGC TATGTGGGGT TACTGGTGCG CTAGCCGCCT TCTACCATGA TGCTCTGGAT GTTAATAACG AGCGCCATCG TGAAATTACC GCCTTCCGTC TGTTGTCTAA AATGCCGACT GTCGCAGCGA TGTGTTATAA ATATTCACTG GGTCAACCGT TTGTTTATCC ACGTAACGAT CTGTCCTACG CGGGTAACTT CCTACACATG ATGTTCTCTA CGCCATGTGA GAAATATGAA GTTAACCCAG TACTGGAACG CGCTATGGAT CGTATTCTCA TCCTGCACGC AGATCACGAA CAGAACGCGT CAACATCGAC CGTCCGTACT GCCGGCTCTT CTGGCGCTAA CCCGTTTGCC TGTATCGCCG CGGGGATCGC ATCCCTGTGG GGCCCTGCGC ACGGTGGTGC CAATGAAGCC TGCCTGAAGA TGTTGGAAGA GATTAAAACT GTTGAGCATA TCCCTGAATT TATCCGCCGC GCGAAAGATA AGAATGACTC ATTCCGTCTG ATGGGTTTTG GTCACCGTGT CTATAAAAAC TATGACCCTC GTGCCACCGT CATGCGTGAA ACCTGTCATG AAGTGTTAGA AGAGCTGAAG CTGAATAACA GCTTGTTAGA AGTGGCGATG GAGTTGGAAA ACATCGCACT GAACGATCCT TACTTCATTG AGAAAAAACT GTATCCAAAC GTGGACTTCT ATTCAGGTAT TATCCTGAAA GCCATGGGGA TTCCATCGTC AATGTTTACG GTGATATTCG CCATTGCCCG AACCATCGGT TGGATTGCTC ACTGGAACGA AATGCATAAT GACGGCATCA AGATTGCCCG TCCGCGCCAG CTTTATACTG GCTATACAGA ACGTGATTTC CAGAGCCAAT TGAAAAAATA A
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Protein sequence | MADKKATLNL GEAAIELGVL SPTLGTDVID VRTLGSKGYF TFDPGFTSTA SCESKITYID GDQGILLHRG FPIAQLAKDS TYLEVCYILL YGETPTPEEY KTFKTTVTRH TMIHEQITRL FHGFRRDSHP MAVLCGVTGA LAAFYHDALD VNNERHREIT AFRLLSKMPT VAAMCYKYSL GQPFVYPRND LSYAGNFLHM MFSTPCEKYE VNPVLERAMD RILILHADHE QNASTSTVRT AGSSGANPFA CIAAGIASLW GPAHGGANEA CLKMLEEIKT VEHIPEFIRR AKDKNDSFRL MGFGHRVYKN YDPRATVMRE TCHEVLEELK LNNSLLEVAM ELENIALNDP YFIEKKLYPN VDFYSGIILK AMGIPSSMFT VIFAIARTIG WIAHWNEMHN DGIKIARPRQ LYTGYTERDF QSQLKK
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