Gene YPK_2971 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_2971 
SymbolsdhD 
ID6088515 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp3271703 
End bp3272050 
Gene Length348 bp 
Protein Length115 aa 
Translation table11 
GC content46% 
IMG OID641598046 
Productsuccinate dehydrogenase cytochrome b556 small membrane subunit 
Protein accessionYP_001721698 
Protein GI170025193 
COG category[C] Energy production and conversion 
COG ID[COG2142] Succinate dehydrogenase, hydrophobic anchor subunit 
TIGRFAM ID[TIGR02968] succinate dehydrogenase, hydrophobic membrane anchor protein 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.021769 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTAAGCA ATGCTTCTGC GTTAGGGCGT AATGGAGTAC ACGATTGGTT GTTACTGCGT 
GCTTCTGCAA TCGTCATCAC CCTGTATGTC TTTTATATTC TGGGCTTCGT TGTGATTGTC
CCAGACATCA CCTATGAAAT CTGGCGCGGT TTCTTCGCGT CACACATCAC AAAAGTATTT
ACGCTGCTGA CATTGCTGTC GATTCTAGCT CACGCTTGGA TCGGTCTATG GCAGGTATTG
ACGGACTATA TAAAGCCACT GGCGATACGA CTGGTGTTAC AACTGGTCGT CGTGATTACG
CTGTTGGTTT ATTTATTGTA TGGAACAATT GTGGTGTGGG GAGCTTAA
 
Protein sequence
MVSNASALGR NGVHDWLLLR ASAIVITLYV FYILGFVVIV PDITYEIWRG FFASHITKVF 
TLLTLLSILA HAWIGLWQVL TDYIKPLAIR LVLQLVVVIT LLVYLLYGTI VVWGA