Gene YPK_2954 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_2954 
Symbol 
ID6088644 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp3252963 
End bp3253772 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content47% 
IMG OID641598029 
Producttol-pal system protein YbgF 
Protein accessionYP_001721681 
Protein GI170025176 
COG category[S] Function unknown 
COG ID[COG1729] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR02795] tol-pal system protein YbgF 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000000655346 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAGTA ACTTCAGACG TCACTTAGTG GGTCTGTCGT TACTGGTTGG CGTAGCGGTC 
CCATGGGCCG CTACTGCCCA AGCGCCAATC AGTAATGTCG GCTCCGGCTC GGTAGAAGAT
CGGGTCACTC AACTTGAGCG TATTTCCAAC GCTCACAGCC AACTATTAAC TCAACTTCAG
CAACAACTGT CAGATTCGCA ACGCGATGTT GATAGTTTAC GCGGTCAGAT CCAAGAAAGT
CAGTACCAGC TCAATCAAGT TGTTGAGCGG CAGAAACAGA TCTACCAACA GATGGAGAGT
CTGAGCGGTG GCCAAGGGGC GCAGAATTCA GCTTCTGCGG CGAGTGGTGC AACAGCAGAC
AATACAGCGG CTGGAAGTTC CGGTAATGCC GACGCAGGCG CAGCAGCTTC TACAGCGGCA
CCAGCAGCAA GTACTGGTGA TGAAAACAGC GATTACAATG TGGCTGTCTC TCTGGCTCTT
GAGAAAAAGC AATATGATCA AGCGATCACT GCTTTTCAGA GTTTTGTGAA ACAGTATCCA
AAATCGACTT ACCAGCCCAA TGCCAACTAT TGGTTAGGGC AGTTGTATTA CAACAAAGGT
AAGAAAGATG ATGCTGCATA TTATTATGCT GTTGTCGTAA AAAATTATCC AAAATCCCCA
AAAAGTTCAG AAGCCATGTT TAAAGTTGGG GTGATCATGC AGGATAAAGG CCAAAGCGAT
AAAGCGAAGG CGGTTTATCA GCAAGTGATC AAGCAATATC CCAATACCGA TGCGGCTAAA
CAGGCACAGA AACGTTTATC TGCTCTTTAG
 
Protein sequence
MNSNFRRHLV GLSLLVGVAV PWAATAQAPI SNVGSGSVED RVTQLERISN AHSQLLTQLQ 
QQLSDSQRDV DSLRGQIQES QYQLNQVVER QKQIYQQMES LSGGQGAQNS ASAASGATAD
NTAAGSSGNA DAGAAASTAA PAASTGDENS DYNVAVSLAL EKKQYDQAIT AFQSFVKQYP
KSTYQPNANY WLGQLYYNKG KKDDAAYYYA VVVKNYPKSP KSSEAMFKVG VIMQDKGQSD
KAKAVYQQVI KQYPNTDAAK QAQKRLSAL