Gene YPK_2946 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_2946 
SymbolgalM 
ID6088052 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp3244289 
End bp3245359 
Gene Length1071 bp 
Protein Length356 aa 
Translation table11 
GC content52% 
IMG OID641598015 
Productaldose 1-epimerase 
Protein accessionYP_001721673 
Protein GI170025168 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2017] Galactose mutarotase and related enzymes 
TIGRFAM ID[TIGR02636] galactose mutarotase 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGAAAA ACGGCGCGGC ATCACCAAAC AGTGTTGACC CGTTAGCACC GGATGGTCAC 
CCTTTTGAAT TCACCAAATT GCAGAATAAA AGCGGTATGA CCGTCACCTT TATGAATTGG
GGGGCAACCT GGTTATCGGC CATATTACCG CTGAAAAATG GTGAGAAACG TGAATTGCTG
CTGGGCTACC CGACACCGGC TGATTACCTG CATCAAGCCG CTTATCTCGG GGCCACGGTT
GGCCGTTATG CCAACCGGAT AGCCAATGCG CAAATCACCT TGGATGGCGA AACAATCCAG
TTGGTCCCGA ACCAAGGCCC TAACCAATTA CACGGTGGCC CGGAAGGTTT CCATGCCCAG
CGTTGGCAGA AAGTGACCCA AGATGACCAC CAGGTTACCT ATAAACTTGA TTCACCAGAT
GGCGATCAAG GTTTCCCCGG TAATCTGACT GTTGAAGTAC AGTACCTGCT AACCGAAGAT
AACCGGCTGG AAATTCATTA TCAGGCACAG GTGGATAAAA CCTGCCCGGT TAACCTGACC
AATCATGCCT ATTTCAACCT TGACGGCGAA GGGCATGATG CCCGTTCACA TCGTTTGCAA
CTGTTTGCAG ACCGTTACCT GCCTGTCGAC AGTGCGGGCA TCCCAACCGG AGGACTCGCT
GATGTCGAGA ATACCGGTAT GGATTTTCGC CAACCTAAAA CATTGGCGCA GGATTTTCTA
CAAGATCGCT GCCAGCAACG AGTTAAAGGC TATGACCACG CTTATTTGCT GCACCGCACC
TGTGGGGCCT TAGACTCTCC GGCGGCACAC TTGTGGTCAT CCGATAACCA GGTGCAAATG
AGTATGTTCA CCTCAGCGCC TGCGTTGCAG CTTTACAGCG GAAATTATCT TGCTGGCACA
CCCGCACGCA ACGGCGGCAC CTATGCCAGC TATGCGGGTG TGGCACTAGA AAGTGAATTT
TTGCCTGATA GCCCTAACCA CCCTGAATGG CCACAGCCCG ATTGTTGGCT AAAACCGGGG
AAGACCTATC GCTCAACGAC GGTTTATCAC TTTATTGCGT TGCCTTTATA A
 
Protein sequence
MLKNGAASPN SVDPLAPDGH PFEFTKLQNK SGMTVTFMNW GATWLSAILP LKNGEKRELL 
LGYPTPADYL HQAAYLGATV GRYANRIANA QITLDGETIQ LVPNQGPNQL HGGPEGFHAQ
RWQKVTQDDH QVTYKLDSPD GDQGFPGNLT VEVQYLLTED NRLEIHYQAQ VDKTCPVNLT
NHAYFNLDGE GHDARSHRLQ LFADRYLPVD SAGIPTGGLA DVENTGMDFR QPKTLAQDFL
QDRCQQRVKG YDHAYLLHRT CGALDSPAAH LWSSDNQVQM SMFTSAPALQ LYSGNYLAGT
PARNGGTYAS YAGVALESEF LPDSPNHPEW PQPDCWLKPG KTYRSTTVYH FIALPL