Gene YPK_2934 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_2934 
Symbol 
ID6089227 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp3233170 
End bp3233991 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content52% 
IMG OID641598003 
Productphosphotransferase 
Protein accessionYP_001721661 
Protein GI170025156 
COG category[R] General function prediction only 
COG ID[COG0561] Predicted hydrolases of the HAD superfamily 
TIGRFAM ID[TIGR00099] Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily
[TIGR01484] HAD-superfamily hydrolase, subfamily IIB 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACATATC GCATAATCGC ACTGGATCTG GACGGAACAC TGTTAGATCA CAAAAAACGC 
ATCCTGCCTG AATCGTTGTC CGCGCTGGCG CAAGCCCGGG CTGAAGGCGT GAAAGTGATC
GTCGTAACAG GCCGCCACCA TGTCGCGATC CATCCGTTTT ATCAGGCACT GCAACTGGAT
ACACCCGCTA TCTGCTGTAA CGGCACTTAT ATTTATGATT ATCAAAATAA AAAAGTGCTG
GATTCAAACC CACTCACTCC ACAACAGGCG GTTCAAGTCC TGCAATTACT GGAGAAAACA
CAGATCCATG GCCTGATGTA TGTGGATGAT GCCATGCTGT ATCAGCAGAC CACGGGCCAT
GTGACCCGCA CCCTCAGTTG GGCCGAGTCA TTGCCGCCCG CTCAGCGCCC GACCTTTCTT
CAGGTCAACA GCTTACTGGA TGCCGCTCAC AGTGCGACCG CCATCTGGAA ATTTGCGACC
TCTCACCCAG ATACTGCACA GTTAAAAGCG TTTGCCGCCA GGGTAGAAGC AGAAATGGGT
CTGGCCTGCG AATGGTCGTG GCATGATCAG GTGGATATCG CCCAAACGGG GAACAGCAAG
GGGAAACGCC TCCAACAGTG GGTTGAATCT CAGGGCATGA GTATGCAAGA GGTGATCGCT
TTTGGTGATA ACTTTAACGA TCTGAGCATG TTAGAGGCTG CGGGATTAGG AGTTGCTATG
GGTAACAGCG ACGATGCGAT TAAACAACGG GCGGACCTGG TGATTGCAGA TAACGAGCAA
CCGGGTATTG CCGCCGTTAT CCGCCAGCAT GTATTAGCCT GA
 
Protein sequence
MTYRIIALDL DGTLLDHKKR ILPESLSALA QARAEGVKVI VVTGRHHVAI HPFYQALQLD 
TPAICCNGTY IYDYQNKKVL DSNPLTPQQA VQVLQLLEKT QIHGLMYVDD AMLYQQTTGH
VTRTLSWAES LPPAQRPTFL QVNSLLDAAH SATAIWKFAT SHPDTAQLKA FAARVEAEMG
LACEWSWHDQ VDIAQTGNSK GKRLQQWVES QGMSMQEVIA FGDNFNDLSM LEAAGLGVAM
GNSDDAIKQR ADLVIADNEQ PGIAAVIRQH VLA