| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_2926 |
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| Symbol | |
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| ID | 6089341 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | - |
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| Start bp | 3222614 |
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| End bp | 3224629 |
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| Gene Length | 2016 bp |
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| Protein Length | 671 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641597995 |
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| Product | excinuclease ABC subunit B |
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| Protein accession | YP_001721653 |
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| Protein GI | 170025148 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0556] Helicase subunit of the DNA excision repair complex |
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| TIGRFAM ID | [TIGR00631] excinuclease ABC, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.826263 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAAAT CATTCAAACT GCATTCTGTG TTTAAGCCAG CTGGCGATCA GCCTGAGGCT
ATCCGTAAAT TGGAGGAGGG GCTGGAAAAT GGTCTGGCAC ACCAGACCCT GCTAGGCGTA
ACAGGATCAG GCAAAACCTT TACGGTTGCT AATGTTATTG CCGATCTGAA CCGGCCAACC
ATGATCCTGG CCCCGAATAA AACACTGGCA GCGCAACTTT ACGGCGAGAT GAAAGAGTTC
TTCCCGGATA ACGCGGTAGA GTACTTTGTC TCCTACTACG ATTATTATCA ACCTGAAGCT
TACGTGCCCA GTTCTGATAC TTTTATTGAG AAGGATGCGT CGGTCAATGA ACACATCGAG
CAGATGCGGC TATCCGCCAC CAAGGCCTTG TTAGAGCGGC GAGATGTGGT GGTCGTGGCG
TCGGTTTCCG CCATTTATGG TCTGGGCGAT CCAGATCTGT ATCTGAAAAT GATGTTGCAC
CTAACCCGTG GCATGATCAT TGATCAACGT TCCATTTTAC GTCGCCTGTC AGAATTGCAA
TACAGCCGCA ACGATCAGGT ATTTCAACGC GGTACTTTTC GGGTTCGGGG TGAAGTGATC
GATATCTTCC CGGCAGAATC TGATGAGTGG GCGCTGCGGG TAGAATTATT TGATGAGGAA
GTCGAGCGAT TATCCATTTT CGATCCACTC ACGGGTCAGC TACAGCATGA AGTCCCTCGC
TTTACTGTTT ATCCTAAAAC ACATTACGTC ACCCCACGGG AACGCATTCT ACAGGCGATG
GAAGAGATAA AAGTCGAGCT GGCGGAGCGG CGTCAGGTGT TGTTAGCCAA TAACAAATTA
TTGGAAGAGC AACGTCTCTC CCAACGTACT CAGTTTGATC TTGAAATGAT GAATGAGCTG
GGCTATTGCT CGGGTATCGA AAACTATTCT CGCTATCTCT CTGGCCGTGG GCCGGGTGAA
GCGCCTCCCA CGTTATTTGA CTATTTACCG GCTGATGGTT TGTTGATTGT CGATGAGTCC
CACGTCACTA TTCCGCAAAT TGGTGGCATG TACAAAGGCG ACCGCTCACG TAAAGAAACC
CTGGTAGAGT ACGGTTTCCG TTTGCCATCG GCACTGGATA ACCGGCCAAT GCGCTTTGAA
GAGTTCGAAG CGTTGGCACC GCAAACGATC TATGTTTCGG CCACACCGGG CAAATACGAG
CTGGAGAAAT CTGGCGGTGA CATTATTGAG CAAGTGGTGC GGCCAACGGG CCTACTCGAT
CCGTTGATCG AGGTCCGCCC GGTAGCCACA CAAGTGGATG ACTTGCTGTC AGAGATCCGC
ATCCGTGCTG CGATTAACGA GCGGGTACTG GTGACCACGC TAACGAAACG AATGGCTGAG
GACTTAACCG ACTATCTCAG CGAGCATGGC GCCAAAGTAC GTTACCTGCA TTCAGATATC
GATACTGTGG AGCGGGTGGA GATTATTCGC GATTTACGCT TGGGTGAATT TGATGTGCTG
GTGGGCATCA ACTTGCTGCG GGAAGGGTTG GATATGCCAG AGGTCTCATT GGTTGCCATT
CTTGATGCAG ATAAAGAGGG CTTCTTGCGT TCTGAACGCT CCTTGATTCA GACTATTGGT
CGTGCTGCCC GTAACCTCAA CGGCAAGGCG ATTTTATACG GCGATAGAAT TACCGCCTCG
ATGGAAAAAG CCATTGGCGA AACGGAACGG CGGCGCGCTA AACAGCAGGC GTATAATGAA
GAACGCGGGA TTATTCCTCA GGGGCTAAAC AAAAAGATTG GCGATATCCT GCAATTGGGC
CAGCCTTCAA TGCGCGGCAA AGGAAAAGGG CGCGGCAGTC ATAAAATGGC CGATACCACC
CAATATCAAT CTTTGTCGCC GAAAGCACTT GATCAGAAAA TCCGTGAACT GGAAGCAAAA
ATGTATACAT ATGCGCAAAA CCTGGAGTTT GAACAGGCGG CTGAATTACG TGATCAGGTT
CATCAACTGC GGCAACAGTT TATTGCAATA TCTTAA
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| Protein sequence | MSKSFKLHSV FKPAGDQPEA IRKLEEGLEN GLAHQTLLGV TGSGKTFTVA NVIADLNRPT
MILAPNKTLA AQLYGEMKEF FPDNAVEYFV SYYDYYQPEA YVPSSDTFIE KDASVNEHIE
QMRLSATKAL LERRDVVVVA SVSAIYGLGD PDLYLKMMLH LTRGMIIDQR SILRRLSELQ
YSRNDQVFQR GTFRVRGEVI DIFPAESDEW ALRVELFDEE VERLSIFDPL TGQLQHEVPR
FTVYPKTHYV TPRERILQAM EEIKVELAER RQVLLANNKL LEEQRLSQRT QFDLEMMNEL
GYCSGIENYS RYLSGRGPGE APPTLFDYLP ADGLLIVDES HVTIPQIGGM YKGDRSRKET
LVEYGFRLPS ALDNRPMRFE EFEALAPQTI YVSATPGKYE LEKSGGDIIE QVVRPTGLLD
PLIEVRPVAT QVDDLLSEIR IRAAINERVL VTTLTKRMAE DLTDYLSEHG AKVRYLHSDI
DTVERVEIIR DLRLGEFDVL VGINLLREGL DMPEVSLVAI LDADKEGFLR SERSLIQTIG
RAARNLNGKA ILYGDRITAS MEKAIGETER RRAKQQAYNE ERGIIPQGLN KKIGDILQLG
QPSMRGKGKG RGSHKMADTT QYQSLSPKAL DQKIRELEAK MYTYAQNLEF EQAAELRDQV
HQLRQQFIAI S
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