Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_2905 |
Symbol | |
ID | 6087980 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | + |
Start bp | 3199594 |
End bp | 3200505 |
Gene Length | 912 bp |
Protein Length | 303 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641597974 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001721632 |
Protein GI | 170025127 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.782139 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAAGAA CAGATCATCT TGGCGGTATC ACTGCTTTTG TCACCACGGC TCAGCAGGGA AGTTTCACCG CTGCCGCAGA AAAACTGGGA CTGACTAAAT CTGCTGTTGG GAAAAGTGTC AGTCGCCTTG AGGATCGTCT CGGGCTGAAG CTATTTCAGC GTTCGACACG ACGGCTCAGC CTGACACCGG ATGGCGAGCG ATTTCTTGCC AGTTGTCAGA GTGCGATAGA CATCCTGGAA CAGGCTGAAG CGGAACTGAT GTCTCATATC TGCCAGCCTT CAGGGCGGCT CAGGGTTGAT TTACCGGCCG CTTTTGGGCG ACAGCGTATA CTTCCTATCC TGCTGGACAT TATCCGACTT TACCCAGAGC TGGCTCTGAC CGTCACATTC AGTGAGCGTT TTGTCGACCT TATTGAGGAA GGCATTGACC TTGTCATTCG CATTGGGGAA CTGGCGGACA GCAGCGGTCT GGTCGCCAGA AGGCTCACGA CGCAAAAACT GGTTATCTGC GCTTCACCGG ATTATCTGCT TTATCACGGC GAGCCTGTCA GTACGGATGA ACTGAGCCAG CATCAGTGCG TTGTCGGATT TCGCCGCAGT CAGCCTATTT CCTGGTTGCT GAAGGAGAGT GACGGCCAAA TCAGTCGCTT TGCGCCACCT CCTACACATG AATTTGGTGA TGGTGACGCT ATGCTTGCTG CCACGCTGGC AGGGGGCGGG TTGTCACAGT TACCCTTGTG GCTGGTTGGT AAATACCTTG AGAGTGGTGA ACTGCGGGAA GTTCTTCCGG GGCATTCCGG AGGTGAAATG CCGATCAGTG CGCTGTGGCC GAAAAACCGT CAACTGCTGC CTAAAATACG CTACGTTGTG GACACGCTGG TTAAGGCAGC AGAAGACGGC CTCCTCGACT GA
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Protein sequence | MRRTDHLGGI TAFVTTAQQG SFTAAAEKLG LTKSAVGKSV SRLEDRLGLK LFQRSTRRLS LTPDGERFLA SCQSAIDILE QAEAELMSHI CQPSGRLRVD LPAAFGRQRI LPILLDIIRL YPELALTVTF SERFVDLIEE GIDLVIRIGE LADSSGLVAR RLTTQKLVIC ASPDYLLYHG EPVSTDELSQ HQCVVGFRRS QPISWLLKES DGQISRFAPP PTHEFGDGDA MLAATLAGGG LSQLPLWLVG KYLESGELRE VLPGHSGGEM PISALWPKNR QLLPKIRYVV DTLVKAAEDG LLD
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