Gene YPK_2903 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_2903 
Symbol 
ID6089219 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp3197553 
End bp3198659 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content48% 
IMG OID641597972 
ProductABC-2 type transporter 
Protein accessionYP_001721630 
Protein GI170025125 
COG category[V] Defense mechanisms 
COG ID[COG0842] ABC-type multidrug transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.751562 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTCATC GCCTATACAC ACTGATTATT AAAGAATTGC AGTCGCTGTT ACGCGAGCCA 
CAGACTCGTG CAATATTAAT TTTGCCCGTA ATATTGCAGG TTATCTTGTT CCCGTTCGCC
GCGACGCTGG AAGTGACGAA TGCCACTATC GCGATTTACA GTGAAGACAG CGGCAAAGCC
TCGGTAGAGT TGACCCAACG TTTTGCCAAA GCGGCCGCAT TTTCGAATGT GCTGCTCCTG
CACAGCCCCC ACGAGATCCA ACCGGTTATT GATAATCAAA AAGCCTTGCT GTTGATCCGC
TTTCCCGCAC AGTTCAGCGC CGATCTGGCC AACGGTAAAA CCACACAGCT CCAGCTCGTT
CTGGATGGGC GTAATTCCAA CAGTGCGCAG ATCGCGGCGA ATTATATTCA GCAAATCGTG
CAAAATTACC AGTTGGAATT GACCAGCGGC CAGATCAAAC CCAATAACAG CGAGTTGGTC
ATCAGGAATT GGTATAACCC GAATCTGGAC TATAAATGGT TCGTAGTACC GTCATTGATT
GCCATGATCA CCACCATCGG TGTACTGATA GTGACCTCGC TGTCAGTGGC CCGCGAGCGC
GAGCAAGGGA CGATGGAGCA ATTGTTGGTT TCACCACTGA CAACATGGCA GATTTTTATC
GGCAAAGCCG TTCCTGCACT GATTGTCGCG ACGTTCCAGG CTTCTATTGT GTTGTTAATT
GGCATCTTTT TCTACCAGAT CCCTTTCGCC GGTTCGTTGG CTCTGTTTTA CGGCACGATG
TTGCTTTATG GCTTGTCTCT GGTCGGTTTT GGTCTATTGA TCTCCTCGTT ATGCTCAACT
CAGCAGCAGG CGTTTATTGG CGTATTTGTC TTTATGATGC CTGCTATTTT GCTTTCTGGT
TATGTCTCTC CGGTAGAGAA CATGCCAATC TGGCTGCAAA ATATCACTTG GATCAATCCT
ATTCGTCATT TTACTGACAT CACCAAACAG ATTTATCTCA AGGATGCCAG TTTCGATATT
ATCTGGCACA GTCTGTGGCC ACTGTTGGTG ATCACTGCCA CTACGGGCAG TGCGGCTTAT
GGTATGTTTC GACGAAAAAT CGCCTAG
 
Protein sequence
MFHRLYTLII KELQSLLREP QTRAILILPV ILQVILFPFA ATLEVTNATI AIYSEDSGKA 
SVELTQRFAK AAAFSNVLLL HSPHEIQPVI DNQKALLLIR FPAQFSADLA NGKTTQLQLV
LDGRNSNSAQ IAANYIQQIV QNYQLELTSG QIKPNNSELV IRNWYNPNLD YKWFVVPSLI
AMITTIGVLI VTSLSVARER EQGTMEQLLV SPLTTWQIFI GKAVPALIVA TFQASIVLLI
GIFFYQIPFA GSLALFYGTM LLYGLSLVGF GLLISSLCST QQQAFIGVFV FMMPAILLSG
YVSPVENMPI WLQNITWINP IRHFTDITKQ IYLKDASFDI IWHSLWPLLV ITATTGSAAY
GMFRRKIA