Gene YPK_2902 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_2902 
Symbol 
ID6088881 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp3196365 
End bp3197540 
Gene Length1176 bp 
Protein Length391 aa 
Translation table11 
GC content51% 
IMG OID641597971 
ProductABC-2 type transporter 
Protein accessionYP_001721629 
Protein GI170025124 
COG category[V] Defense mechanisms 
COG ID[COG0842] ABC-type multidrug transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.194373 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCGAGC AGAATATTTC GCCGGTAGCT AAGGGCGAGA CTTATCAAGA CACCGGATTC 
TCTTGGCGGC GTCTGCGTGC CTTATGCCAC AAAGAAACTC GGCAAATTTT ACGTGACCCC
AGCAGTGGGC TGATCGCGGT GGTCATTCCC CTCATGCTGC TGTTTATTTT TGGCTATGGT
ATTAACCTTG ATTCCAGCAA ATTGCATGTG GGCATTTTAC TGGAGCAGCA GAGTAAACCG
GCGCAAGATT TGGCTAACGC CTTCGCTAAT TCGCCTTATA TTGCCGCGCA AATCAGTGAT
GACCGCGAAG CACTGATTCA TACCATGCAA GCCGGTACGA TCCGTGGGCT CATTGTTATT
CCGAATGACT TTGCCGAACA ACTCGCGCGC CCTGAAGGTA AAGCACCGAT TCAGGTGATC
ACCGATGGCA GTGAACCCAA TACCGCCAAT TTTGTGCAAG GCTATGCACA AGGGGTCTGG
CAACTTTGGC AACAGCAACA GGCACAGAAT ACTGGGCAAA AAAATGATCC GCTCATTGAG
ATTCAGGTGC GCTATTGGTT TAACCCCGCG GCAATCAGCC GACACTTTAT TATTCCCGGC
GCTATCACCA TTATTATGAC GGTCATCGGG GCGATTTTGA CCTCGCTGGT TATCGCCCGC
GAGTGGGAGC GCGGTACGAT GGAGGCGCTG TTATCTACTC AGGTCACACG CAGTGAATTA
CTGCTATCAA AACTTCTTCC CTATTATGTC CTTGGCATGT TCGCCATGGC GCTGTGCATG
CTGGTATCGG TGTTCATTCT GGGGGTGCCC TATCGCGGTT CGCTGGGGAT CTTGTTCATC
ACCACCAGCC TGTTTTTAGC CAGTACATTG GGGATGGGGT TGTTGATCTC CACGCTGACT
CGCAACCAAT TTAACGCCGC GATGATCGCG TTGAACGCGG CATTTTTGCC TGCGGTAATG
CTATCTGGTT TTATTTTTGA AATTGACAGT ATGCCTGCCG TCGTTCGAGC CGTAACCTAT
ATCATTCCTG CCCGCTACTT TGTCAGCAGC CTGCAAACGC TGTTTCTGGC GGGAAATATC
GGTACTGTTT TGGTGGTTAA TCTGCTGTTT CTGATCGTAT CAGCCGTCGT GTTTATCGGC
CTGACCGCCT GGAAGACCCG ACGTCGGCTG GATTAA
 
Protein sequence
MAEQNISPVA KGETYQDTGF SWRRLRALCH KETRQILRDP SSGLIAVVIP LMLLFIFGYG 
INLDSSKLHV GILLEQQSKP AQDLANAFAN SPYIAAQISD DREALIHTMQ AGTIRGLIVI
PNDFAEQLAR PEGKAPIQVI TDGSEPNTAN FVQGYAQGVW QLWQQQQAQN TGQKNDPLIE
IQVRYWFNPA AISRHFIIPG AITIIMTVIG AILTSLVIAR EWERGTMEAL LSTQVTRSEL
LLSKLLPYYV LGMFAMALCM LVSVFILGVP YRGSLGILFI TTSLFLASTL GMGLLISTLT
RNQFNAAMIA LNAAFLPAVM LSGFIFEIDS MPAVVRAVTY IIPARYFVSS LQTLFLAGNI
GTVLVVNLLF LIVSAVVFIG LTAWKTRRRL D