Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_2902 |
Symbol | |
ID | 6088881 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | + |
Start bp | 3196365 |
End bp | 3197540 |
Gene Length | 1176 bp |
Protein Length | 391 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641597971 |
Product | ABC-2 type transporter |
Protein accession | YP_001721629 |
Protein GI | 170025124 |
COG category | [V] Defense mechanisms |
COG ID | [COG0842] ABC-type multidrug transport system, permease component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.194373 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCCGAGC AGAATATTTC GCCGGTAGCT AAGGGCGAGA CTTATCAAGA CACCGGATTC TCTTGGCGGC GTCTGCGTGC CTTATGCCAC AAAGAAACTC GGCAAATTTT ACGTGACCCC AGCAGTGGGC TGATCGCGGT GGTCATTCCC CTCATGCTGC TGTTTATTTT TGGCTATGGT ATTAACCTTG ATTCCAGCAA ATTGCATGTG GGCATTTTAC TGGAGCAGCA GAGTAAACCG GCGCAAGATT TGGCTAACGC CTTCGCTAAT TCGCCTTATA TTGCCGCGCA AATCAGTGAT GACCGCGAAG CACTGATTCA TACCATGCAA GCCGGTACGA TCCGTGGGCT CATTGTTATT CCGAATGACT TTGCCGAACA ACTCGCGCGC CCTGAAGGTA AAGCACCGAT TCAGGTGATC ACCGATGGCA GTGAACCCAA TACCGCCAAT TTTGTGCAAG GCTATGCACA AGGGGTCTGG CAACTTTGGC AACAGCAACA GGCACAGAAT ACTGGGCAAA AAAATGATCC GCTCATTGAG ATTCAGGTGC GCTATTGGTT TAACCCCGCG GCAATCAGCC GACACTTTAT TATTCCCGGC GCTATCACCA TTATTATGAC GGTCATCGGG GCGATTTTGA CCTCGCTGGT TATCGCCCGC GAGTGGGAGC GCGGTACGAT GGAGGCGCTG TTATCTACTC AGGTCACACG CAGTGAATTA CTGCTATCAA AACTTCTTCC CTATTATGTC CTTGGCATGT TCGCCATGGC GCTGTGCATG CTGGTATCGG TGTTCATTCT GGGGGTGCCC TATCGCGGTT CGCTGGGGAT CTTGTTCATC ACCACCAGCC TGTTTTTAGC CAGTACATTG GGGATGGGGT TGTTGATCTC CACGCTGACT CGCAACCAAT TTAACGCCGC GATGATCGCG TTGAACGCGG CATTTTTGCC TGCGGTAATG CTATCTGGTT TTATTTTTGA AATTGACAGT ATGCCTGCCG TCGTTCGAGC CGTAACCTAT ATCATTCCTG CCCGCTACTT TGTCAGCAGC CTGCAAACGC TGTTTCTGGC GGGAAATATC GGTACTGTTT TGGTGGTTAA TCTGCTGTTT CTGATCGTAT CAGCCGTCGT GTTTATCGGC CTGACCGCCT GGAAGACCCG ACGTCGGCTG GATTAA
|
Protein sequence | MAEQNISPVA KGETYQDTGF SWRRLRALCH KETRQILRDP SSGLIAVVIP LMLLFIFGYG INLDSSKLHV GILLEQQSKP AQDLANAFAN SPYIAAQISD DREALIHTMQ AGTIRGLIVI PNDFAEQLAR PEGKAPIQVI TDGSEPNTAN FVQGYAQGVW QLWQQQQAQN TGQKNDPLIE IQVRYWFNPA AISRHFIIPG AITIIMTVIG AILTSLVIAR EWERGTMEAL LSTQVTRSEL LLSKLLPYYV LGMFAMALCM LVSVFILGVP YRGSLGILFI TTSLFLASTL GMGLLISTLT RNQFNAAMIA LNAAFLPAVM LSGFIFEIDS MPAVVRAVTY IIPARYFVSS LQTLFLAGNI GTVLVVNLLF LIVSAVVFIG LTAWKTRRRL D
|
| |