Gene YPK_2888 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_2888 
Symbol 
ID6087592 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp3184958 
End bp3185887 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content34% 
IMG OID641597957 
Producthypothetical protein 
Protein accessionYP_001721615 
Protein GI170025110 
COG category[S] Function unknown 
COG ID[COG3595] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.645043 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCACAAG TTAATAACAT ATCGACAAAC AATACACACT CAGCCGGCTT TAATAACTCA 
AATTCAATTC AAAAATATAC TGGAGCAGTC TCATCTATAA GTAATGATTT ACGTATTAAT
AATAAAAATT GCAAGAGTAA TATAGGAACT ATAAGTGGTG ATATAAAAAT TAATCGCCAT
TCTGAAGTCT ACGGTAATGT GAATTCAATC AGTGGCGATA TTACTGTAAA AAAATCTATA
GTAGATAAAA ATATCACCAC AGTAAGTGGT GATGTTAACG CGGTGAATTC GACTATAGGA
AAAAATATAA AAACAGTCAG TGGTTCGATT GAGGTGGAAC AATCAACTGT AAGCGGCAAT
TTGGAAACAA CAAGTGGTAG GATAGATATA GATACAACAA AAATTAACGG TAATGTGCAT
ACGACAAGTG GTTCAATTTC GCTGAATGAT TCAACTATTG ATGGTAGCGT AACATGTAAG
GCGGGGTCTG TAACAATTGT CAATTCAACA ATTAAAGAAA GCCTTAATGT AACCAGTGAG
AAAATAATTG TTGGTACAGC ATCTTGTATT GGAAAAATTA ACATTTCCCC CCCTGAATTT
GTAAATGTTA ACATCACGAG TTTTGGGAGT GGTAATATAA TGATGGGAAT GGGGAATCTT
TGTATTTCAG GAGGGGTAAA TGTTACCATT ACTAATGGTA AAGTATTTGT TAATGAACAA
AGGGGCGGCC ATACAGCTTC GCAATCAACT TCGAAAAAAG TAGAAGAAGT TACTATTAAT
ATCGCGAAAA ATGCCAGTGT TAATGATATT GTTTTTTATA CTAAAAAGTG CCATATCATT
TTAGAAGGAA ATGCTAAATA TAACGGAGAA AAAAAGGATG GCATGCAATT TACCCATGTT
AACGCACCGA AAAGTCATGC TTATGCGTAA
 
Protein sequence
MPQVNNISTN NTHSAGFNNS NSIQKYTGAV SSISNDLRIN NKNCKSNIGT ISGDIKINRH 
SEVYGNVNSI SGDITVKKSI VDKNITTVSG DVNAVNSTIG KNIKTVSGSI EVEQSTVSGN
LETTSGRIDI DTTKINGNVH TTSGSISLND STIDGSVTCK AGSVTIVNST IKESLNVTSE
KIIVGTASCI GKINISPPEF VNVNITSFGS GNIMMGMGNL CISGGVNVTI TNGKVFVNEQ
RGGHTASQST SKKVEEVTIN IAKNASVNDI VFYTKKCHII LEGNAKYNGE KKDGMQFTHV
NAPKSHAYA