Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_2888 |
Symbol | |
ID | 6087592 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | - |
Start bp | 3184958 |
End bp | 3185887 |
Gene Length | 930 bp |
Protein Length | 309 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 641597957 |
Product | hypothetical protein |
Protein accession | YP_001721615 |
Protein GI | 170025110 |
COG category | [S] Function unknown |
COG ID | [COG3595] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.645043 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCACAAG TTAATAACAT ATCGACAAAC AATACACACT CAGCCGGCTT TAATAACTCA AATTCAATTC AAAAATATAC TGGAGCAGTC TCATCTATAA GTAATGATTT ACGTATTAAT AATAAAAATT GCAAGAGTAA TATAGGAACT ATAAGTGGTG ATATAAAAAT TAATCGCCAT TCTGAAGTCT ACGGTAATGT GAATTCAATC AGTGGCGATA TTACTGTAAA AAAATCTATA GTAGATAAAA ATATCACCAC AGTAAGTGGT GATGTTAACG CGGTGAATTC GACTATAGGA AAAAATATAA AAACAGTCAG TGGTTCGATT GAGGTGGAAC AATCAACTGT AAGCGGCAAT TTGGAAACAA CAAGTGGTAG GATAGATATA GATACAACAA AAATTAACGG TAATGTGCAT ACGACAAGTG GTTCAATTTC GCTGAATGAT TCAACTATTG ATGGTAGCGT AACATGTAAG GCGGGGTCTG TAACAATTGT CAATTCAACA ATTAAAGAAA GCCTTAATGT AACCAGTGAG AAAATAATTG TTGGTACAGC ATCTTGTATT GGAAAAATTA ACATTTCCCC CCCTGAATTT GTAAATGTTA ACATCACGAG TTTTGGGAGT GGTAATATAA TGATGGGAAT GGGGAATCTT TGTATTTCAG GAGGGGTAAA TGTTACCATT ACTAATGGTA AAGTATTTGT TAATGAACAA AGGGGCGGCC ATACAGCTTC GCAATCAACT TCGAAAAAAG TAGAAGAAGT TACTATTAAT ATCGCGAAAA ATGCCAGTGT TAATGATATT GTTTTTTATA CTAAAAAGTG CCATATCATT TTAGAAGGAA ATGCTAAATA TAACGGAGAA AAAAAGGATG GCATGCAATT TACCCATGTT AACGCACCGA AAAGTCATGC TTATGCGTAA
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Protein sequence | MPQVNNISTN NTHSAGFNNS NSIQKYTGAV SSISNDLRIN NKNCKSNIGT ISGDIKINRH SEVYGNVNSI SGDITVKKSI VDKNITTVSG DVNAVNSTIG KNIKTVSGSI EVEQSTVSGN LETTSGRIDI DTTKINGNVH TTSGSISLND STIDGSVTCK AGSVTIVNST IKESLNVTSE KIIVGTASCI GKINISPPEF VNVNITSFGS GNIMMGMGNL CISGGVNVTI TNGKVFVNEQ RGGHTASQST SKKVEEVTIN IAKNASVNDI VFYTKKCHII LEGNAKYNGE KKDGMQFTHV NAPKSHAYA
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