| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_2887 |
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| Symbol | |
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| ID | 6087897 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | - |
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| Start bp | 3183720 |
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| End bp | 3184664 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641597956 |
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| Product | tRNA-dihydrouridine synthase C |
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| Protein accession | YP_001721614 |
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| Protein GI | 170025109 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0042] tRNA-dihydrouridine synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTATGC GAGTAATACT GGCACCGATG GAAGGTGTAT TAGATTCGCT GGTGCGTGAA
TTGCTCAGTG AAGTAAATGA TTACGACCTT TGCATCACCG AGTTTTTGCG GGTGGTTGAT
CAACTGCTGC CTGCTAAATC TTTCTACCGC CTATGTCCTG AATTGCACAA TCAAAGCCGT
ACCCAGTCTG GCACATTAGT ACGTATCCAA TTATTAGGCC AATACCCAGA GTGGCTGGCA
GAAAATGCGG CTCGAGCGGT AGCGCTTGGT TCATATGGTG TTGATCTCAA TTGCGGGTGT
CCTTCAAAAC TGGTTAACGG CAGTGGCGGC GGGGCAACCT TGCTAAAAGA TCCAGAACTG
ATTTATCAAG GTGCAAAAGC CATGCGTGCG GCTGTTCCGG CCCATCTCCC CGTCACGGTA
AAAATTCGTT TAGGTTGGGA TTCTGGTGAT CGCCAATTTG AAATTGCTGA TGCCGTGCAG
CAAGCGGGGG CGACCGAATT GGCTGTTCAT GGTCGAACCA AAGAAGATGG CTATCAAGCT
GAACGGATTA ACTGGCAAGC CATTGGTGAG ATTCGCCAGC GCCTGACGAT TCCAGTTATT
GCTAATGGTG AAATTTGGGA TTACCAGAGC GCACAAGAGT GCATGAAAGT GACCGGTTGT
GATGCCGTGA TGCTAGGCCG TGGCGCGCTG AATGTGCCTA ATCTGAGCCG GGTGGTGAAG
TATAACGAAC CGCGTATGCC GTGGCTGGAA GTGGTCAAAC TACTGCAAAA ATATGTGCAG
TTGGAAAAGC AGGGCGATAC CGGCTTGTAT CATGTTGCGC GCATCAAACA GTGGTTGGGG
TATCTACGTA AAGAATATAC CGAAGCGACA GATTTATTCG GTGAAATCCG CGCATTAAAA
AACTCGAAGG ATATTGCGCT GGCAATTCAG CGTATTAATC GTTAA
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| Protein sequence | MSMRVILAPM EGVLDSLVRE LLSEVNDYDL CITEFLRVVD QLLPAKSFYR LCPELHNQSR
TQSGTLVRIQ LLGQYPEWLA ENAARAVALG SYGVDLNCGC PSKLVNGSGG GATLLKDPEL
IYQGAKAMRA AVPAHLPVTV KIRLGWDSGD RQFEIADAVQ QAGATELAVH GRTKEDGYQA
ERINWQAIGE IRQRLTIPVI ANGEIWDYQS AQECMKVTGC DAVMLGRGAL NVPNLSRVVK
YNEPRMPWLE VVKLLQKYVQ LEKQGDTGLY HVARIKQWLG YLRKEYTEAT DLFGEIRALK
NSKDIALAIQ RINR
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