Gene YPK_2878 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_2878 
Symbol 
ID6087867 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp3176350 
End bp3177186 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content41% 
IMG OID641597949 
Productphosphonate ABC transporter, ATPase subunit 
Protein accessionYP_001721607 
Protein GI170025102 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3638] ABC-type phosphate/phosphonate transport system, ATPase component 
TIGRFAM ID[TIGR02315] phosphonate ABC transporter, ATP-binding protein 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGCCAGG TATTACGTAA ACTCACTGCA GCTGATTATC CAGTAGTGGT GCAAGAACCA 
CGTAAAAAGG TACTTGCTGT TAAAGGATTA GTAAAAGCAT ATAAGTCGCA GCACCGTGTT
CTGGATAATA TTAATTTTGA ACTACACGCT GGTGAGTTTG TGGCGATAAT TGGTCGTTCA
GGTGCGGGTA AATCAACACT ATTACATATT CTAAATGGTA CGATCCCTAC CAGCGCGGGT
GAAATTATTA ATTATCATGA AAATGGTGAT ACACAAAATA TTGCGGCATT GACGACAAAG
CAAATGCGTA AATGGCGCGC AAAGTGTGGC ATGATTTTTC AGGATTTCTG TTTGGTTCCC
CGATTAGATG TTATCACCAA TGTTTTATTG GGACGTCTAA GTTATACATC GACATTAAAA
TCATTTTTCA AACTATTTTC TGAGCAAGAC CAGGCCAGAG CCATCGAATT ATTGCAATGG
CTGAATATGT TGCCCCACGC ATTGCAGCGG GCAGAAAACC TCTCTGGTGG TCAGATGCAG
CGGGTGGCGA TCTGCCGTGC CATGATGCAG AACCCCAAAA TATTATTAGC TGATGAACCT
GTCGCATCGT TGGACCCTAA AAATACGACA CGTATTATGA ATACGTTACA GAAAATCAGT
GAAAATGATA TTGCCGTCAT TGTTAATTTA CACTCAGTCG ATTTAGTTAA AGATTATTGC
ACCCGAGTGA TAGGCATTGC TCACGGGCGA ATTATCTTTG ATGGGCCACC CAGTATGCTG
AATGACAGTA TTATTCAAGA TATTTATAGT GATGAGTCAG CCGAGCTTTT ACATTAA
 
Protein sequence
MGQVLRKLTA ADYPVVVQEP RKKVLAVKGL VKAYKSQHRV LDNINFELHA GEFVAIIGRS 
GAGKSTLLHI LNGTIPTSAG EIINYHENGD TQNIAALTTK QMRKWRAKCG MIFQDFCLVP
RLDVITNVLL GRLSYTSTLK SFFKLFSEQD QARAIELLQW LNMLPHALQR AENLSGGQMQ
RVAICRAMMQ NPKILLADEP VASLDPKNTT RIMNTLQKIS ENDIAVIVNL HSVDLVKDYC
TRVIGIAHGR IIFDGPPSML NDSIIQDIYS DESAELLH