| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_2872 |
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| Symbol | |
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| ID | 6088424 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | - |
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| Start bp | 3169357 |
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| End bp | 3170958 |
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| Gene Length | 1602 bp |
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| Protein Length | 533 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641597943 |
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| Product | urea ABC transporter, permease protein UrtB |
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| Protein accession | YP_001721601 |
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| Protein GI | 170025096 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
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| TIGRFAM ID | [TIGR03409] urea ABC transporter, permease protein UrtB |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0183692 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATCGT TAATTCCTGT TTGGAATAGG GCAATCAATT ATGTGTTCAG GCCGATGATA
GGTCTGTTAC TGGGCTTATC GATGTCGGCA ATGGCAGGGC CAGCACAGGA TTTTGTTGCG
GCGAATCGTG CACAGCAGGC CACATTATTA CAACAGTGGG CAACGGAACC TGATGCTAGC
CGATTACCTC TTTTGCAGGC GCTAAAACAA GAAACAGTAG TGGTAGACAG TGCCGGCCAA
GCGTTTATTA AAAATAATCA AAGTATTAAT TCGCTGGAAG GCCAATCGCA ACCGACCGGT
ACGCTGAAAA AAATCTGGCT CAACAACCGG TTACGTATCT TGATCGCCAA TGCCCTGGCG
GCACAACGCT TAGTCAGTGA CGATGAAACC GTGCGTTTAC AGGCGGCAGT TGAATTACAA
CGGCAGGCAC AGAGCGATCA ACTACCGCTG CTGAATCAAC GCCTGAAGTT GGAAACGGAC
AGTCAGGTCA AAGAGGCATT GAGCATTGCA CTCGCCAATT TACAACTGAC GGACAGTAAT
CCGCAGGTGC GTCTGAATGC CGTGCAATTG TTGGGGCAAT CAGGTTCACC GCAAACTCAA
TCACGGCTGC AAAGTTTAAC CGATACGCAG GTTGAACCGA ATGAACAGGT CCGAGCCGCA
GCAGCCACCA GTTTGAAACA GATACAACAT CGGTTGATGA TTGGGGAGGT TATTGGGCAG
GTATTTAGCG GACTATCATT GGGTTCAATC TTACTGCTGG CGGCATTGGG GTTAGCTATC
ACCTATGGCT TACTGGGGGT GATCAATATG GCGCATGGTG AAATGCTGAT GTTGGGAGCC
TATTCCGCCT ATCTGGTGCA ATCGCTATTC CAACAATTTG CCCCACACTG GCTGGCACTT
TATCCATTAA TCGCTCTACC GGTTGCGTTC TTTATTACTG CGGGCATTGG TATGGCGTTG
GAACGCACGG TGATTCGGCA TCTGTATGGC CGCCCGTTGG AAACACTGCT AGCGACGTGG
GGGATCAGCC TGATGTTGAT TCAGGGGGTC CGCATGTTGT TTGGCCCACA GAATTTGGAA
GTTGCTAACC CTGCATGGCT GTCCGGTGGG GTTCAGGTTT TACCTAATCT GGTTTTACCG
TGGAATCGGA TCGCGGTGAT TGCATTTGTC ATTATTGTTT TGCTACTCAC ATGGTTGCTG
CTGAATAAAA CCCGCCTTGG TCTGCAAGTC CGTGCAGTGA CACAAAATCG GGCAATGGCG
GCCTGCTGCG GAGTGGCTAC GGGGCGGGTT GATATGCTGG CATTCGGTTT GGGTTCTGGT
ATTGCAGGGC TTGGCGGTGT AGCACTCTCG CAATTGGGCA ATGTCGGCCC GGAATTAGGG
CAGGGTTATA TCATCGACTC CTTCTTGGTG GTGGTCCTGG GTGGCGTCGG GCAATTAGCT
GGCAGTGTGG TTGCCGCATT AGGTCTGGGG ATGTTGAATA AAATTTTGGA ACCACAAATT
GGCGCAGTAT TGGGCAAAAT CCTGATTTTA GTGCTGATCA TTTTATTTAT TCAGAAACGA
CCGCAGGGTC TGTTTGCCCT TAAGGGCAGG GTGAGTGACT AA
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| Protein sequence | MKSLIPVWNR AINYVFRPMI GLLLGLSMSA MAGPAQDFVA ANRAQQATLL QQWATEPDAS
RLPLLQALKQ ETVVVDSAGQ AFIKNNQSIN SLEGQSQPTG TLKKIWLNNR LRILIANALA
AQRLVSDDET VRLQAAVELQ RQAQSDQLPL LNQRLKLETD SQVKEALSIA LANLQLTDSN
PQVRLNAVQL LGQSGSPQTQ SRLQSLTDTQ VEPNEQVRAA AATSLKQIQH RLMIGEVIGQ
VFSGLSLGSI LLLAALGLAI TYGLLGVINM AHGEMLMLGA YSAYLVQSLF QQFAPHWLAL
YPLIALPVAF FITAGIGMAL ERTVIRHLYG RPLETLLATW GISLMLIQGV RMLFGPQNLE
VANPAWLSGG VQVLPNLVLP WNRIAVIAFV IIVLLLTWLL LNKTRLGLQV RAVTQNRAMA
ACCGVATGRV DMLAFGLGSG IAGLGGVALS QLGNVGPELG QGYIIDSFLV VVLGGVGQLA
GSVVAALGLG MLNKILEPQI GAVLGKILIL VLIILFIQKR PQGLFALKGR VSD
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