| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_2871 |
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| Symbol | |
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| ID | 6087858 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | - |
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| Start bp | 3168281 |
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| End bp | 3169357 |
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| Gene Length | 1077 bp |
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| Protein Length | 358 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641597942 |
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| Product | urea ABC transporter, permease protein UrtC |
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| Protein accession | YP_001721600 |
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| Protein GI | 170025095 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR03408] urea ABC transporter, permease protein UrtC |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.00794762 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATCAAC CACTGACGGT AACCTTAACG CAAAAAGCAC CGCTTACCAG CCTGTTATTA
GGTATGGTCA CGCTGATCGC ACTGATTGTT CTGCCTTTTT TGGCGCTGTT ACCGGCGGAT
CATCCGTTGG CGATATCAAC CTATACCCTG ACGCTGATCG GCAAAATATT ATGTTATGCC
GTGGTGGCTA TCGCCCTTGA TCTGGTTTGG GGATATGCCG GATTGCTATC ACTTGGGCAC
GGATTATTTT TTGCTCTGGG CGGTTATGCC ATGGGGATGT ATCTGATGCG TCAGGCTGCG
GGAGACGGTT TACCTGCGTT TATGTCTTTT TTATCGTGGT CTGAGCTTCC TTGGTTTTGG
AGCGGCAGTC AGTACTTTGT TTGGGCATTG TGCCTAATTG TACTGGTTCC CGGGTTGCTG
GCTTTTCTGT TCGGTTATTT TGCTTTTCGC TCCAAAATCA AAGGCGTCTA TTTTTCTATT
ATGACGCAGG CTCTGACCTA CGCGGGTATG TTGTTATTTT TCCGCAATGA AACGGGTTTT
GGTGGCAATA ACGGCTTTAC TGGCTTCACT ACGATGCTGG GGTTCCCTGT CTCGGCCACC
TCTACCCGTA TCGCATTATT TCTGGCAACC CTCGCACTGC TCATTGCCAG TCTGGCGCTG
GGGCTGGCAT TAGCGCGCAC TAAATTTGGT CGGGTATTGA CGGCGGTACG CGATGCCGAA
AACCGCCTGA TGTTTTGTGG TTATGATCCT AAAGGTTTCA AGCTGTTTGT CTGGACTCTA
TCGGCGGTAC TTTGTGCTCT GGCAGGCGCG TTATATGTAC CGCAGGTGGG CATTATCAAT
CCCAGTGAAA TGTCACCGAC CAACTCAATT GAAGCGGCAA TTTGGGTGGC ACTAGGGGGC
CGAGGAACTC TGATAGGGCC GGTATTGGGG GCCGGAATTG TCAACGGTGC CAAAAGTTGG
TTCACCATGG CGATGCCGGA ATACTGGCAA TTTTTTCTTG GCCTGATATT CATTCTGGTC
ACGTTATTTT TGCCGAAGGG GGTTATTGGG CTATTGCGCA GGGGGAAAGA CCAATGA
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| Protein sequence | MNQPLTVTLT QKAPLTSLLL GMVTLIALIV LPFLALLPAD HPLAISTYTL TLIGKILCYA
VVAIALDLVW GYAGLLSLGH GLFFALGGYA MGMYLMRQAA GDGLPAFMSF LSWSELPWFW
SGSQYFVWAL CLIVLVPGLL AFLFGYFAFR SKIKGVYFSI MTQALTYAGM LLFFRNETGF
GGNNGFTGFT TMLGFPVSAT STRIALFLAT LALLIASLAL GLALARTKFG RVLTAVRDAE
NRLMFCGYDP KGFKLFVWTL SAVLCALAGA LYVPQVGIIN PSEMSPTNSI EAAIWVALGG
RGTLIGPVLG AGIVNGAKSW FTMAMPEYWQ FFLGLIFILV TLFLPKGVIG LLRRGKDQ
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