| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_2870 |
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| Symbol | |
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| ID | 6088385 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | - |
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| Start bp | 3167448 |
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| End bp | 3168284 |
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| Gene Length | 837 bp |
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| Protein Length | 278 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641597941 |
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| Product | urea ABC transporter, ATP-binding protein UrtD |
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| Protein accession | YP_001721599 |
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| Protein GI | 170025094 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4674] Uncharacterized ABC-type transport system, ATPase component |
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| TIGRFAM ID | [TIGR03411] urea ABC transporter, ATP-binding protein UrtD |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0170195 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCGGT TTCAACTGAC GGAGCAACTG ATTCATGCCG AGATAAATGT TCAGGAGCCT
GGAACGATAC AGCATGCGGC TGATCAATAT CGCCAGCAGC GCGATCCGGT ACTGACGCTG
GAAAACATCA ACGTCAGCTT TGATGGTTTT CATGCGTTAC GTAATCTTTC ATTACAAATC
GGTGTTGGGG AGTTGCGTTG TATCATTGGC CCGAATGGGG CGGGGAAAAC CACACTGATG
GATGTGATCA CCGGTAAGAC GCGGCCACAA ACAGGCAAGA TGGTGTATGA CCAACACCAT
GATCTTTCCA CCATGAATAC CATTGAGATT GCTCATGCCG GTATTGGGCG AAAATTCCAG
AAACCCACGG TATTTGAGGC CTTGAGTGTC TTTGAAAATT TAGAACTGGC ACAAAAAAAC
CATAAAACTG TGTGGGCCAG CTTGTGCGCC AAACTCAACA GTGAACAACG GGATCAGATT
GATGAAACGC TGGCCATATT GCGTTTAAGT GATCTGCGGC AGCGGCAAGC GGGGTTGTTA
TCCCACGGTC AAAAGCAGTT TCTTGAGATT GGTATGTTGT TGGTACAAGA CCCGCATCTA
TTGTTATTAG ATGAGCCAGC CGCAGGAATG ACTGATGCCG AGACGGCGTA TACTGCTGAG
TTGTTTAATC AGTTGGCGGG TAAGCACTCG TTAATGGTGG TGGAACACGA TATGGGGTTT
ATCGAGACGA TTGCTGATCA TGTCACTGTG TTGCACCAAG GGCAGGTGTT GGCCGAGGGA
TCACTGGCAG AGGTACAGGA GAATGATCAG GTGATTGAGG TGTATTTAGG GCGTTGA
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| Protein sequence | MSRFQLTEQL IHAEINVQEP GTIQHAADQY RQQRDPVLTL ENINVSFDGF HALRNLSLQI
GVGELRCIIG PNGAGKTTLM DVITGKTRPQ TGKMVYDQHH DLSTMNTIEI AHAGIGRKFQ
KPTVFEALSV FENLELAQKN HKTVWASLCA KLNSEQRDQI DETLAILRLS DLRQRQAGLL
SHGQKQFLEI GMLLVQDPHL LLLDEPAAGM TDAETAYTAE LFNQLAGKHS LMVVEHDMGF
IETIADHVTV LHQGQVLAEG SLAEVQENDQ VIEVYLGR
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