| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_2860 |
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| Symbol | |
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| ID | 6089688 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | - |
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| Start bp | 3154228 |
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| End bp | 3156534 |
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| Gene Length | 2307 bp |
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| Protein Length | 768 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641597931 |
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| Product | lysine decarboxylase |
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| Protein accession | YP_001721589 |
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| Protein GI | 170025084 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1982] Arginine/lysine/ornithine decarboxylases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.041352 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTGATT TAAGCAGTCA CAAGAAACGC AACGTTTTAG TGGTTGACAG CAATATTCGT
GATATCAATA CCGCTAATGG TCGGGCGGTA AACGAACTTA TCATTGCGCT TAATGACATT
AATTTTAATG TGATTGCGGC GGCGACGTTT GAAGATGGCG CGGCAACAGT GATCTCCGAC
TCTTCGTTGT GCTGTATTTT TGTCGATTGG ACTTCGGGTG GTAATGATGA TGAATCCCAT
AGTCAGGCAT TTGCATTGCT ACAAGACATT CGTCGCCGTA ATAAATCAGT GCCTGTGTTA
TTGATGGCTG AGCATTCATG TATCAATAGC TTAAGTTTGG AGACCATGCA GCTTGTTAAT
GAATTTGTTT GGATGCATGA AGATACCTCC GAGTTTATCG CTGCTCGTGC CAAAGCACTC
ATCATCAAGT ATTACCAGCA GTTGCTGCCG CCTTTTACGC AAGCGCTGTT TCAATATACG
CAAGATAATC CTGAATATTC ATGGGCTGCC CCCGGTCATC AAGGGGGCGT TGCCTTCAGT
AAGACGGCGG TTGGACGCGA GTTTCTTGAT TTCTTTGGCG AGAATCTATT TCGTACGGAT
ACTGGTATTG AACGTGAGTC ATTGGGATCT TTACTGGATC ACAGTGGGCC GATAAAAGAG
TCAGAAGCGT ATGCCGCACA AGTTTTTGGT GCACATGCAA GTTACTCGAT GCTTAATGGC
ACATCGAGCT CTAATCGCGC CATTATGGCC GCTGTCGTGG GAGATAAGCA GATCGCATTG
TGTGATCGTA ACTGTCATAA ATCCATTGAG CAGGGATTGG TCCTGTCGGG TGCATTACCG
GTATTTTTTA TTCCAACCCG TAACCGCTAT GGCATTATTG GACCAATTCC TAAAGCACAA
TTCCAACCCA CGGCTATTGC ACAAAAAATT GAACAAAACC CCTTAAAGTC ATTGGCTTGT
GATAGCAAGC CCGTCTATGC AGTTATCACG AATTGTACCT ATGACGGTAT GTGCTATAAC
GCCCAACAGG CACAGGATTT ATTGGCAAAA AGTGTTGATC AGATTCATTT CGACGAAGCT
TGGTACGCCT ATGCCCGTTT TAATCCCCTT TATCGGGAGC GTTTTGCGAT GCGTGGTGAC
CCGGCTGACC ATGATGCGCT GGGACCAACT ATTTTTGCTA CACAATCAAC GCATAAATTA
TTGGCAGCGC TGTCGCAAGC TTCTTATATT CATGTGAGAA ATGGCAAAAA GCCGATAGAA
CATTCGCGGT TTAATGAGTC GTATATGTTG CAGTCAACCA CTTCGCCATT GTACGCCATT
ATTGCTGCCA ATGAAGTGGG GGCGGCGATG ATGGAAGGCG GGCAGGGGCT AGCATTGACA
CAAGAGGTGA TCGATGAAGC TGTTGATTTT CGGTTGGCGC TGGCTCGTGC ACATGATGCT
TTTGCAAAAC AAGGCGAATG GTTCTTTAAA CCTTGGAATA CACCGGAAAT AACGGATAGC
AAAAGCGGTA AAAAGTTACC TTTCTCCCAA GCATCACGAG AGCAACTGAC AACCGATCCC
GCCTGTTGGG TTCTCAAGCC GGGAGACCCG TGGCATGGTT TCGAGCAGTT GGAAGAAGAT
TGGTGCATGT TGGATCCGAT CAAGGCCGGG ATTATGGTGC CGGGAATGGG GGATGACGGT
AAGTTGTCAG AAAAGGGAAT TCCCGCAGCG ATAGTGACCG CCTTCCTTGG GCAGCGGGGA
ATTGTACCGT CGCGGACCAC GGATTTTATG GTGCTGTGCT TGTTTTCGGT GGGTGTAACG
AAAGGTAAAT GGGGCACACT CATTAATGTG TTACTGGAAT TTAAGCAGCA CTACGATAGC
AATACACCGA TATCGGTGTG CCTACCTGAC TTGGCGAAAA ATTATCCTCA TCAATACGCT
CATAAGGGGT TAAAAGTGTT GTGTGATGAG ATGTTTGCTT ATATGAAGAT CAGTGAAATG
GATAAACTGC AAGCTGAGGC ATTTAGCCAT TTGCCTACGC CAGTGGTCTT ACCCCGTCAG
GCTTTTCAAG ATCATATGGC TGGGCGGTGT GAGCTACTAC CTATCGATAA GCTCGCTGGG
CGTGTTACCG CTGTCGGGGT TATTCCATAT CCGCCGGGCA TCCCAATTGT CATGCCGGGG
GAGAGTTTTG GTAGCCATGA AGAACCATGG CTACGTTATA TCTTAAGTAT CACCAAATGG
GGTCAGCATT TTCCCGGCTT CGAGAAGATC TTGGAAGGGT CCGAGCAGAA GAATGGGCAA
TATTTTATTT GGGTACTAAA GCAGTAA
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| Protein sequence | MIDLSSHKKR NVLVVDSNIR DINTANGRAV NELIIALNDI NFNVIAAATF EDGAATVISD
SSLCCIFVDW TSGGNDDESH SQAFALLQDI RRRNKSVPVL LMAEHSCINS LSLETMQLVN
EFVWMHEDTS EFIAARAKAL IIKYYQQLLP PFTQALFQYT QDNPEYSWAA PGHQGGVAFS
KTAVGREFLD FFGENLFRTD TGIERESLGS LLDHSGPIKE SEAYAAQVFG AHASYSMLNG
TSSSNRAIMA AVVGDKQIAL CDRNCHKSIE QGLVLSGALP VFFIPTRNRY GIIGPIPKAQ
FQPTAIAQKI EQNPLKSLAC DSKPVYAVIT NCTYDGMCYN AQQAQDLLAK SVDQIHFDEA
WYAYARFNPL YRERFAMRGD PADHDALGPT IFATQSTHKL LAALSQASYI HVRNGKKPIE
HSRFNESYML QSTTSPLYAI IAANEVGAAM MEGGQGLALT QEVIDEAVDF RLALARAHDA
FAKQGEWFFK PWNTPEITDS KSGKKLPFSQ ASREQLTTDP ACWVLKPGDP WHGFEQLEED
WCMLDPIKAG IMVPGMGDDG KLSEKGIPAA IVTAFLGQRG IVPSRTTDFM VLCLFSVGVT
KGKWGTLINV LLEFKQHYDS NTPISVCLPD LAKNYPHQYA HKGLKVLCDE MFAYMKISEM
DKLQAEAFSH LPTPVVLPRQ AFQDHMAGRC ELLPIDKLAG RVTAVGVIPY PPGIPIVMPG
ESFGSHEEPW LRYILSITKW GQHFPGFEKI LEGSEQKNGQ YFIWVLKQ
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